Evidence map›Paper›PMID 38180563›Full record

ArticleArchives of microbiology2024

Analysis of phenotypic changes in high temperature and low pH extreme conditions of Alicyclobacillus sendaiensis PA2 related with the cell wall and sporulation genes.

Lourdes Yaret Ortiz-Cortés, Elva Teresa Aréchiga-Carvajal, Lucía María Cristina Ventura-Canseco, Victor Manuel Ruíz-Valdiviezo, Federico Antonio Gutiérrez-Miceli, Peggy Elizabeth Alvarez-Gutiérrez

Abstract read
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In one paragraph

Article in Archives of microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Lourdes Yaret Ortiz-CortésTecnológico Nacional de México/IT de Tuxtla Gutiérrez, Carretera Panamericana Km 1080, Col. Terán, 29050, Tuxtla Gutiérrez, Chiapas, México.ORCID http://orcid.org/0000-0001-7202-2717
Elva Teresa Aréchiga-CarvajalUniversidad Autónoma de Nuevo León, Ciudad Universitaria, 66455, San Nicolás de las Garzas, Nuevo León, México.ORCID http://orcid.org/0000-0002-4434-2534
Lucía María Cristina Ventura-CansecoTecnológico Nacional de México/IT de Tuxtla Gutiérrez, Carretera Panamericana Km 1080, Col. Terán, 29050, Tuxtla Gutiérrez, Chiapas, México.ORCID http://orcid.org/0000-0001-6983-0430
Victor Manuel Ruíz-ValdiviezoTecnológico Nacional de México/IT de Tuxtla Gutiérrez, Carretera Panamericana Km 1080, Col. Terán, 29050, Tuxtla Gutiérrez, Chiapas, México.ORCID http://orcid.org/0000-0003-0572-8845
Federico Antonio Gutiérrez-MiceliTecnológico Nacional de México/IT de Tuxtla Gutiérrez, Carretera Panamericana Km 1080, Col. Terán, 29050, Tuxtla Gutiérrez, Chiapas, México.ORCID http://orcid.org/0000-0002-5379-1518
Peggy Elizabeth Alvarez-GutiérrezTecnológico Nacional de México/IT de Tuxtla Gutiérrez, Carretera Panamericana Km 1080, Col. Terán, 29050, Tuxtla Gutiérrez, Chiapas, México. peggy.alvarez@hotmail.com.ORCID http://orcid.org/0000-0001-5085-1186
Tuxtla Gutierrez Institute of Technology · MXUniversidad Autónoma de Nuevo León · MX

Funding

Consejo Nacional de Humanidades, Ciencia y Tecnologia (National Council of Humanities, Science and Technology, México) 853058
6 · The paper itself

Abstract

The A. sendaiensis PA2 is a polyextremophile bacterium. In this study, we analyze the A. sendaiensis PA2 genome. The genome was assembled and annotated. The A. sendaiensis PA2 genome structure consists of a 2,956,928 bp long chromosome and 62.77% of G + C content. 3056 CDSs were predicted, and 2921 genes were assigned to a putative function. The ANIm and ANIb value resulted in 97.17% and 96.65%, the DDH value was 75.5%, and the value of TETRA (Z-score) was 0.98. Comparative genomic analyses indicated that three systems are enriched in A. sendaiensis PA2. This strain has phenotypic changes in cell wall during batch culture at 65 °C, pH 5.0 and without carbon and nitrogen source. The presence of unique genes of cell wall and sporulation subsystem could be related to the adaptation of A. sendaiensis PA2 to hostile conditions.

Indexed as

AlicyclobacillusCell WallHydrogen-Ion ConcentrationTemperatureAcidophilic bacteriaBacterial cell wallBacterial exomaterialChiapasChichon crater lakeThermophilic bacteria

Identifiers

PMID38180563
OpenAlexW4390613067

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.