Evidence map›Paper›PMID 38179459›Full record

ArticleFrontiers in microbiology2023

Suboxic DOM is bioavailable to surface prokaryotes in a simulated overturn of an oxygen minimum zone, Devil's Hole, Bermuda.

Rachel J Parsons, Shuting Liu, Krista Longnecker, Kevin Yongblah, Carys Johnson, Luis M Bolaños, Jacqueline Comstock, Keri Opalk, Melissa C Kido Soule, Rebecca Garley and 3 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Rachel J ParsonsMicrobial Ecology Laboratory, Bermuda Institute of Ocean Sciences, St. George's, Bermuda.
Shuting LiuDepartment of Ecology, Evolution and Marine Biology, Marine Science Institute, University of California, Santa Barbara, California, CA, United States.
Krista LongneckerDepartment of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, MA, United States.
Kevin YongblahMicrobial Ecology Laboratory, Bermuda Institute of Ocean Sciences, St. George's, Bermuda.
Carys JohnsonMicrobial Ecology Laboratory, Bermuda Institute of Ocean Sciences, St. George's, Bermuda.
Luis M BolañosSchool of Biosciences, University of Exeter, Exeter, United Kingdom.
Jacqueline ComstockDepartment of Ecology, Evolution and Marine Biology, Marine Science Institute, University of California, Santa Barbara, California, CA, United States.
Keri OpalkDepartment of Ecology, Evolution and Marine Biology, Marine Science Institute, University of California, Santa Barbara, California, CA, United States.
Melissa C Kido SouleDepartment of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, MA, United States.
Rebecca GarleyMicrobial Ecology Laboratory, Bermuda Institute of Ocean Sciences, St. George's, Bermuda.
Craig A CarlsonDepartment of Ecology, Evolution and Marine Biology, Marine Science Institute, University of California, Santa Barbara, California, CA, United States.
Ben TempertonSchool of Biosciences, University of Exeter, Exeter, United Kingdom.
Nicholas R BatesMicrobial Ecology Laboratory, Bermuda Institute of Ocean Sciences, St. George's, Bermuda.
University of California, Santa Barbara · USArizona State University · USUniversity of Exeter · GBWoods Hole Oceanographic Institution · USBermuda Institute of Ocean Sciences · BMSyracuse University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oxygen minimum zones (OMZs) are expanding due to increased sea surface temperatures, subsequent increased oxygen demand through respiration, reduced oxygen solubility, and thermal stratification driven in part by anthropogenic climate change. Devil's Hole, Bermuda is a model ecosystem to study OMZ microbial biogeochemistry because the formation and subsequent overturn of the suboxic zone occur annually. During thermally driven stratification, suboxic conditions develop, with organic matter and nutrients accumulating at depth. In this study, the bioavailability of the accumulated dissolved organic carbon (DOC) and the microbial community response to reoxygenation of suboxic waters was assessed using a simulated overturn experiment. The surface inoculated prokaryotic community responded to the deep (formerly suboxic) 0.2 μm filtrate with cell densities increasing 2.5-fold over 6 days while removing 5 μmol L

Indexed as

ammonia oxidationcarbon fixationchemoautotrophydegradation indexSAR202 cladeThaumarcheotatotal dissolved amino acids

Identifiers

PMID38179459
PMCPMC10765504
OpenAlexW4390008005

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.