Evidence map›Paper›PMID 38179201›Full record

ArticleWorld journal of radiology2023

Methods for improving colorectal cancer annotation efficiency for artificial intelligence-observer training.

Matthew Grudza, Brandon Salinel, Sarah Zeien, Matthew Murphy, Jake Adkins, Corey T Jensen, Curtis Bay, Vikram Kodibagkar, Phillip Koo, Tomislav Dragovich and 5 more

Open access · diamondAbstract read
In one paragraph

Article in World journal of radiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 61% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 0 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

Matthew GrudzaSchool of Biological Health and Systems Engineering, Arizona State University, Tempe, AZ 85287, United States.
Brandon SalinelDepartment of Radiology, Banner MD Anderson Cancer Center, Gilbert, AZ 85234, United States.
Sarah ZeienSchool of Osteopathic Medicine, A.T. Still University, Mesa, AZ 85206, United States.
Matthew MurphySchool of Osteopathic Medicine, A.T. Still University, Mesa, AZ 85206, United States.
Jake AdkinsDepartment of Abdominal Imaging, MD Anderson Cancer Center, Houston, TX 77030, United States.
Corey T JensenDepartment of Abdominal Imaging, University Texas MD Anderson Cancer Center, Houston, TX 77030, United States.
Curtis BayDepartment of Interdisciplinary Sciences, A.T. Still University, Mesa, AZ 85206, United States.
Vikram KodibagkarSchool of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ 85287, United States.
Phillip KooDepartment of Radiology, Banner MD Anderson Cancer Center, Gilbert, AZ 85234, United States.
Tomislav DragovichDivision of Cancer Medicine, Banner MD Anderson Cancer Center, Gilbert, AZ 85234, United States.
Michael A ChotiDepartment of Surgical Oncology, Banner MD Anderson Cancer Center, Gilbert, AZ 85234, United States.
Madappa KundrandaDivision of Cancer Medicine, Banner MD Anderson Cancer Center, Gilbert, AZ 85234, United States.
Tanveer Syeda-MahmoodIBM Almaden Research Center, IBM, San Jose, CA 95120, United States.
Hong-Zhi WangIBM Almaden Research Center, IBM, San Jose, CA 95120, United States.
John ChangDepartment of Radiology, Banner MD Anderson Cancer Center, Gilbert, AZ 85234, United States. changresearch1@gmail.com.
Arizona State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMissing occult cancer lesions accounts for the most diagnostic errors in retrospective radiology reviews as early cancer can be small or subtle, making the lesions difficult to detect. Second-observer is the most effective technique for reducing these events and can be economically implemented with the advent of artificial intelligence (AI).

aimTo achieve appropriate AI model training, a large annotated dataset is necessary to train the AI models. Our goal in this research is to compare two methods for decreasing the annotation time to establish ground truth: Skip-slice annotation and AI-initiated annotation.

methodsWe developed a 2D U-Net as an AI second observer for detecting colorectal cancer (CRC) and an ensemble of 5 differently initiated 2D U-Net for ensemble technique. Each model was trained with 51 cases of annotated CRC computed tomography of the abdomen and pelvis, tested with 7 cases, and validated with 20 cases from The Cancer Imaging Archive cases. The sensitivity, false positives per case, and estimated Dice coefficient were obtained for each method of training. We compared the two methods of annotations and the time reduction associated with the technique. The time differences were tested using Friedman's two-way analysis of variance.

resultsSparse annotation significantly reduces the time for annotation particularly skipping 2 slices at a time (

conclusionOur data support the sparse annotation technique as an efficient technique for reducing the time needed to establish the ground truth.

Indexed as

Artificial intelligenceColorectal cancerDetection

Identifiers

PMID38179201
PMCPMC10762523
OpenAlexW4390204718

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.