Evidence map›Paper›PMID 38178888›Full record

ArticleFrontiers in neurology2023

Ferroptosis-related genes are considered as potential targets for CPAP treatment of obstructive sleep apnea.

Jing Huang, Hezi Zhang, Lichao Cao, Fang Chen, Weinan Lin, Qinghua Lu, Xiao Huang, Qi Weng, Qin Yang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in neurology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jing Huang *Shantou University Medical College, Shantou, Guangdong Province, China.
Hezi Zhang *Shenzhen Nucleus Gene Technology Co., Ltd., Shenzhen, Guangdong Province, China.
Lichao CaoShenzhen Nucleus Gene Technology Co., Ltd., Shenzhen, Guangdong Province, China.
Fang ChenShenzhen Nucleus Gene Technology Co., Ltd., Shenzhen, Guangdong Province, China.
Weinan LinShantou University Medical College, Shantou, Guangdong Province, China.
Qinghua LuDepartment of Respiratory Diseases, Shenzhen Children's Hospital, Shenzhen, Guangdong Province, China.
Xiao HuangDepartment of Respiratory Diseases, Shenzhen Children's Hospital, Shenzhen, Guangdong Province, China.
Qi WengShenzhen Nucleus Gene Technology Co., Ltd., Shenzhen, Guangdong Province, China.
Qin YangDepartment of Respiratory Diseases, Shenzhen Children's Hospital, Shenzhen, Guangdong Province, China.
Shenzhen Children's Hospital · CNShantou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Obstructive sleep apnea (OSA) is a common syndrome characterized by upper airway dysfunction during sleep. Continuous positive airway pressure (CPAP) is the most frequently utilized non-surgical treatment for OSA. Ferroptosis play a crucial role in the physiological diseases caused by chronic intermittent hypoxia, but its involvement in the development of OSA and the exact mechanisms have incompletely elucidated. GSE75097 microarray dataset was used to identify differentially expressed genes between OSA patients and CPAP-treated OSA patients. Subsequently, Gene Ontology (GO) annotation, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway, STRING database, and FerrDb database were conducted to analyze the biological functions of differentially expressed genes and screen ferroptosis-related genes. Finally, GSE135917 dataset employed for validation. There were 1,540 differentially expressed genes between OSA patients and CPAP-treated OSA patients. These differentially expressed genes were significantly enriched in the regulation of interleukin-1-mediated signaling pathway and ferroptosis-related signaling pathway. Subsequently, 13 ferroptosis-related genes (DRD5, TSC22D3, TFAP2A, STMN1, DDIT3, MYCN, ELAVL1, JUN, DUSP1, MIB1, PSAT1, LCE2C, and MIR27A) were identified from the interaction between differentially expressed genes and FerrDb database, which are regarded as the potential targets of CPAP-treated OSA. These ferroptosis-related genes were mainly involved in cell proliferation and apoptosis and MAPK signaling pathway. Furthermore, DRD5 and TFAP2A were downregulated in OSA patients, which showed good diagnostic properties for OSA, but these abnormal signatures are not reversed with short-term effective CPAP therapy. In summary, the identification of 13 ferroptosis-related genes as potential targets for the CPAP treatment of OSA provides valuable insights into the development of novel, reliable, and accurate therapeutic options.

Indexed as

bioinformatics analysischronic intermittent hypoxiacontinuous positive airway pressureferroptosisobstructive sleep apnea

Identifiers

PMID38178888
PMCPMC10764456
OpenAlexW4390056125

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.