SAXS/WAXS data of conformationally flexible ribose binding protein.

Jagrity Choudhury, Kento Yonezawa, Anu Anu, Nobutaka Shimizu, Barnali Chaudhuri

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Article in Data in brief, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 authors at 2 institutions in 2 countries.

Jagrity ChoudhuryGN Ramachandran Protein Center, CSIR Institute of Microbial Technology, Chandigarh 160036, India.

Kento YonezawaStructural Biology Research Center, Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK), 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan.

Anu AnuGN Ramachandran Protein Center, CSIR Institute of Microbial Technology, Chandigarh 160036, India.

Nobutaka ShimizuStructural Biology Research Center, Institute of Materials Structure Science, High Energy Accelerator Research Organization (KEK), 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan.

Barnali ChaudhuriGN Ramachandran Protein Center, CSIR Institute of Microbial Technology, Chandigarh 160036, India.

Institute of Microbial Technology · INHigh Energy Accelerator Research Organization · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Modern artificial intelligence-based protein structure prediction methods, such as Alphafold2, can predict structures of folded proteins with reasonable accuracy. However, Alphafold2 provides a static view of a protein, which does not show the conformational variability of the protein, domain movement in a multi-domain protein, or ligand-induced conformational changes it might undergo in solution. Small-angle X-ay scattering (SAXS) and wide-angle X-ray scattering (WAXS) are solution techniques that can aid in integrative modeling of conformationally flexible proteins, or in validating their predicted ensemble structures. While SAXS is sensitive to global structural features, WAXS can expand the scope of structural modeling by including information about local structural changes. We present SAXS and WAXS datasets obtained from conformationally flexible d-ribose binding protein (RBP) from

Indexed as

Conformational flexibilityRibose binding proteinSmall-angle X-ray scatteringWide-angle X-ray scattering

Identifiers

PMID38178847

DOI10.1016/j.dib.2023.109932

PMCPMC10764985

OpenAlexW4389504138

What OpenQuestion holds

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LicenceCC BY

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.