Evidence map›Paper›PMID 38177917›Full record

ArticleEMBO reports2024

UBXN1 maintains ER proteostasis and represses UPR activation by modulating translation.

Brittany A Ahlstedt, Rakesh Ganji, Sirisha Mukkavalli, Joao A Paulo, Steve P Gygi, Malavika Raman

Open access · diamondAbstract read
In one paragraph

Article in EMBO reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Brittany A AhlstedtDepartment of Developmental Molecular and Chemical Biology, Tufts University School of Medicine, Boston, MA, USA.ORCID http://orcid.org/0000-0001-7895-9412
Rakesh GanjiDepartment of Developmental Molecular and Chemical Biology, Tufts University School of Medicine, Boston, MA, USA.ORCID http://orcid.org/0000-0003-2874-5007
Sirisha MukkavalliDepartment of Developmental Molecular and Chemical Biology, Tufts University School of Medicine, Boston, MA, USA.ORCID http://orcid.org/0000-0002-8875-7985
Joao A PauloDepartment of Cell Biology Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-4291-413X
Steve P GygiDepartment of Cell Biology Harvard Medical School, Boston, MA, USA.
Malavika RamanDepartment of Developmental Molecular and Chemical Biology, Tufts University School of Medicine, Boston, MA, USA. malavika.raman@tufts.edu.ORCID http://orcid.org/0000-0002-4773-8673
Tufts University · USHarvard University · US

Funding

New Sample Multiplexing Technologies to Identify Chemical Probes and Illuminate Ubiquitin BiologyR01GM067945 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI GYGI, STEVEN P · 2003 to 2024
$10.5M
“Regulation of Protein Quality Control by the VCP AAA-ATPase”R01GM127557 · NIGMS · TUFTS UNIVERSITY BOSTON · PI Malavika Raman · 2018 to 2026
$3.5M
Advancing Multiplexed Isobaric Tag-based Strategies for Proteome ProfilingR01GM132129 · NIGMS · HARVARD MEDICAL SCHOOL · PI PAULO, JOAO A · 2019 to 2023
$1.7M
Investigating the impact of p97 mutation in Amyotrophic Lateral SclerosisR21NS123631 · NINDS · TUFTS UNIVERSITY BOSTON · PI RAMAN, MALAVIKA · 2022 to 2023
$454k
NIGMS NIH HHS R01 GM067945NIGMS NIH HHS R01 GM127557NIGMS NIH HHS R01 GM132129NINDS NIH HHS R21 NS123631
6 · The paper itself

Abstract

ER protein homeostasis (proteostasis) is essential for proper folding and maturation of proteins in the secretory pathway. Loss of ER proteostasis can lead to the accumulation of misfolded or aberrant proteins in the ER and triggers the unfolded protein response (UPR). In this study, we find that the p97 adaptor UBXN1 is an important negative regulator of the UPR. Loss of UBXN1 sensitizes cells to ER stress and activates the UPR. This leads to widespread upregulation of the ER stress transcriptional program. Using comparative, quantitative proteomics we show that deletion of UBXN1 results in a significant enrichment of proteins involved in ER-quality control processes including those involved in protein folding and import. Notably, we find that loss of UBXN1 does not perturb p97-dependent ER-associated degradation (ERAD). Our studies indicate that loss of UBXN1 increases translation in both resting and ER-stressed cells. Surprisingly, this process is independent of p97 function. Taken together, our studies have identified a new role for UBXN1 in repressing translation and maintaining ER proteostasis in a p97 independent manner.

Indexed as

ProteostasisUnfolded Protein ResponseEndoplasmic Reticulum StressProtein FoldingProteinsProteinsER Stressp97TranslationUbiquitinUnfolded Protein Response

Identifiers

PMID38177917
PMCPMC10897191
OpenAlexW4390512469

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.