Evidence map›Paper›PMID 38177507›Full record

ArticleNature methods2024

Image restoration of degraded time-lapse microscopy data mediated by near-infrared imaging.

Nicola Gritti, Rory M Power, Alyssa Graves, Jan Huisken

Abstract read
In one paragraph

Article in Nature methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Where imaging and metrics meet.Nature methods · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Nicola Gritti *Morgridge Institute for Research, Madison, WI, USA.ORCID http://orcid.org/0000-0002-7637-4258
Rory M Power *Morgridge Institute for Research, Madison, WI, USA.ORCID http://orcid.org/0000-0003-2425-7241
Alyssa GravesMorgridge Institute for Research, Madison, WI, USA.
Jan HuiskenMorgridge Institute for Research, Madison, WI, USA. jan.huisken@uni-goettingen.de.ORCID http://orcid.org/0000-0001-7250-3756

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) EXC 2067/1-390729940Human Frontier Science Program (HFSP) LT000227/2018-LHuman Frontier Science Program (HFSP) LT000321/2015-C
6 · The paper itself

Abstract

Time-lapse fluorescence microscopy is key to unraveling biological development and function; however, living systems, by their nature, permit only limited interrogation and contain untapped information that can only be captured by more invasive methods. Deep-tissue live imaging presents a particular challenge owing to the spectral range of live-cell imaging probes/fluorescent proteins, which offer only modest optical penetration into scattering tissues. Herein, we employ convolutional neural networks to augment live-imaging data with deep-tissue images taken on fixed samples. We demonstrate that convolutional neural networks may be used to restore deep-tissue contrast in GFP-based time-lapse imaging using paired final-state datasets acquired using near-infrared dyes, an approach termed InfraRed-mediated Image Restoration (IR

Indexed as

DrosophilaZebrafishAnimalsGreen Fluorescent ProteinsMicroscopy, FluorescenceTime-Lapse ImagingGreen Fluorescent Proteins

Identifiers

PMID38177507
PMCPMC10864180

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.