Evidence map›Paper›PMID 38177499›Full record

ArticleThe EMBO journal2024

Molecular mechanism of allosteric activation of the CRISPR ribonuclease Csm6 by cyclic tetra-adenylate.

Liyang Du, Qinwei Zhu, Zhonghui Lin

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  5. Diversity and abundance of ring nucleases in type III CRISPR-Cas loci.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Liyang DuCollege of Chemistry, Fuzhou University, 350108, Fuzhou, China.ORCID 0000-0003-3873-4387
Qinwei ZhuCollege of Chemistry, Fuzhou University, 350108, Fuzhou, China.
Zhonghui LinCollege of Chemistry, Fuzhou University, 350108, Fuzhou, China. zhonghui.lin@fzu.edu.cn.ORCID 0000-0001-5797-7347
Fuzhou University · CN

Funding

MOST | National Natural Science Foundation of China (NSFC) 31971222
6 · The paper itself

Abstract

Type III CRISPR systems are innate immune systems found in bacteria and archaea, which produce cyclic oligoadenylate (cOA) second messengers in response to viral infections. In these systems, Csm6 proteins serve as ancillary nucleases that degrade single-stranded RNA (ssRNA) upon activation by cOA. In addition, Csm6 proteins also possess cOA-degrading activity as an intrinsic off-switch to avoid degradation of host RNA and DNA that would eventually lead to cell dormancy or cell death. Here, we present the crystal structures of Thermus thermophilus (Tt) Csm6 alone, and in complex with cyclic tetra-adenylate (cA

Indexed as

Clustered Regularly Interspaced Short Palindromic RepeatsNucleotides, CyclicRibonucleasesAllosteric RegulationRNAcyclic tetra-adenylateNucleotides, CyclicRibonucleasesRNAAllosteric ActivationAncillary NucleaseCsm6Cyclic OligoadenylateType III CRISPR

Identifiers

PMID38177499
PMCPMC10897365
OpenAlexW4389947003

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.