Evidence map›Paper›PMID 38177497›Full record

ArticleThe EMBO journal2024

B. subtilis MutS2 splits stalled ribosomes into subunits without mRNA cleavage.

Esther N Park, Timur Mackens-Kiani, Rebekah Berhane, Hanna Esser, Chimeg Erdenebat, A Maxwell Burroughs, Otto Berninghausen, L Aravind, Roland Beckmann, Rachel Green and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 22 citations in OpenAlex.

  1. Collided ribosomes are rescued by the endonuclease Rae1 andbioRxiv : the preprint server for biology · 2026
    Article
  2. Translation factors that keep the ribosome Pro-active.Microbiology and molecular biology reviews : MMBR · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Ribosome-associated quality control and related mechanisms.Nature structural & molecular biology · 2026
    Review
  7. Article
  8. Article
  9. Plant MutS2 proteins function in plastid ribosome quality control.bioRxiv : the preprint server for biology · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. The RNA helicase HrpA rescues collided ribosomes inbioRxiv : the preprint server for biology · 2024
    Article
  18. Article
  19. Expansion of the MutS Gene Family in Plants.bioRxiv : the preprint server for biology · 2024
    Article
  20. Article
4 · The record

Corrections and comments

  • Update of
    2023
5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Esther N ParkDepartment of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Timur Mackens-KianiGene Center and Department of Biochemistry, University of Munich, Munich, Germany.
Rebekah BerhaneDepartment of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Hanna EsserGene Center and Department of Biochemistry, University of Munich, Munich, Germany.
Chimeg ErdenebatGene Center and Department of Biochemistry, University of Munich, Munich, Germany.
A Maxwell BurroughsComputational Biology Branch, Intramural Research Program, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
Otto BerninghausenGene Center and Department of Biochemistry, University of Munich, Munich, Germany.
L AravindComputational Biology Branch, Intramural Research Program, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.ORCID http://orcid.org/0000-0003-0771-253X
Roland BeckmannGene Center and Department of Biochemistry, University of Munich, Munich, Germany.ORCID http://orcid.org/0000-0003-4291-3898
Rachel GreenDepartment of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID http://orcid.org/0000-0001-9337-2003
Allen R BuskirkDepartment of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, MD, USA. buskirk@jhmi.edu.ORCID http://orcid.org/0000-0003-2720-6896
Johns Hopkins University · USUnited States National Library of Medicine · USHoward Hughes Medical Institute · US

Funding

Evolutionary Analysis and Comparative Genomics of Protein SuperfamiliesZIALM594244 · NLM · NATIONAL LIBRARY OF MEDICINE · PI ARAVIND, L · 2009 to 2025
$20.3M
The role of collisions in rescuing stalled ribosomes in bacteriaR01GM136960 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI Allen Rowdon Buskirk · 2021 to 2026
$1.9M
Deutsche Forschungsgemeinschaft (DFG) TRR174HHS | NIH | National Institute of General Medical Sciences (NIGMS) GM136960NIGMS NIH HHS R01 GM136960
6 · The paper itself

Abstract

Stalled ribosomes are rescued by pathways that recycle the ribosome and target the nascent polypeptide for degradation. In E. coli, these pathways are triggered by ribosome collisions through the recruitment of SmrB, a nuclease that cleaves the mRNA. In B. subtilis, the related protein MutS2 was recently implicated in ribosome rescue. Here we show that MutS2 is recruited to collisions by its SMR and KOW domains, and we reveal the interaction of these domains with collided ribosomes by cryo-EM. Using a combination of in vivo and in vitro approaches, we show that MutS2 uses its ABC ATPase activity to split ribosomes, targeting the nascent peptide for degradation through the ribosome quality control pathway. However, unlike SmrB, which cleaves mRNA in E. coli, we see no evidence that MutS2 mediates mRNA cleavage or promotes ribosome rescue by tmRNA. These findings clarify the biochemical and cellular roles of MutS2 in ribosome rescue in B. subtilis and raise questions about how these pathways function differently in diverse bacteria.

Indexed as

Bacillus subtilisProtein BiosynthesisEscherichia coliPeptidesRibosomesRNA, MessengerPeptidesRNA, MessengerABC ATPaseB. subtilisMutS2Ribosome CollisionsRibosome Quality Control (RQC)

Identifiers

PMID38177497
PMCPMC10897456
OpenAlexW4389976050

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.