Evidence map›Paper›PMID 38177383›Full record

ArticleScientific reports2024

Diurnal retinal and choroidal gene expression patterns support a role for circadian biology in myopia pathogenesis.

Richard A Stone, John W Tobias, Wenjie Wei, Jonathan Schug, Xia Wang, Lixin Zhang, P Michael Iuvone, Debora L Nickla

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Optical and Visual Diet in Myopia.Investigative ophthalmology & visual science · 2025
    Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Richard A StoneDepartment of Ophthalmology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA. stone@pennmedicine.upenn.edu.ORCID 0000-0002-9833-4425
John W TobiasPenn Genomics and Sequencing Core, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.ORCID 0000-0002-5362-7013
Wenjie WeiDepartment of Ophthalmology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.ORCID 0000-0002-1720-1808
Jonathan SchugPenn Genomics and Sequencing Core, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.ORCID 0000-0001-6885-7869
Xia WangDepartment of Biomedical Sciences and Disease, New England College of Optometry, Boston, MA, USA.ORCID 0009-0005-5336-7011
Lixin ZhangDepartment of Biomedical Sciences and Disease, New England College of Optometry, Boston, MA, USA.ORCID 0009-0003-7779-0733
P Michael IuvoneDepartment of Ophthalmology and Department of Pharmacology and Chemical Biology, Emory University School of Medicine, Atlanta, GA, USA.ORCID 0000-0002-2510-3896
Debora L NicklaDepartment of Biomedical Sciences and Disease, New England College of Optometry, Boston, MA, USA.ORCID 0000-0003-4027-8237
University of Pennsylvania · USNew England College of Optometry · USEmory University · US

Funding

Scientific TransparencyP30EY001583 · NEI · UNIVERSITY OF PENNSYLVANIA · PI Qi N Cui · 1985 to 2026
$19.5M
P30-Core Grant for Vision Research Core CP30EY006360 · NEI · EMORY UNIVERSITY · PI BOATRIGHT, JEFFREY H · 1986 to 2025
$15.3M
Retinal Mechanisms of Refractive DevelopmentR01EY016435 · NEI · GEORGIA INSTITUTE OF TECHNOLOGY · PI Machelle T. Pardue · 2009 to 2026
$5.4M
Vision, eye growth rhythms and retinal signals in refractive developmentR01EY025307 · NEI · NEW ENGLAND COLLEGE OF OPTOMETRY · PI NICKLA, DEBORA L · 2016 to 2022
$3.6M
NEI NIH HHS P30 EY001583NEI NIH HHS P30 EY006360NEI NIH HHS R01 EY016435NEI NIH HHS R01 EY025307NIH HHS R01 EY025307
6 · The paper itself

Abstract

The prevalence of myopia (nearsightedness) is increasing to alarming levels, but its etiology remains poorly understood. Because both laboratory and clinical findings suggest an etiologic role for circadian rhythms in myopia development, we assayed gene expression by RNA-Seq in retina and choroid at the onset of unilateral experimental myopia in chick, isolating tissues every 4 h during a single 24-h period from myopic and contralateral control eyes. Occluded versus open eye gene expression differences varied considerably over the 24-h sampling period, with some occurring at multiple times of day but with others showing differences at only a single investigated timepoint. Some of the genes identified in retina or choroid of chick myopia were previously identified as candidate genes for common human myopia. Like differentially expressed genes, pathways identified by Gene Set Enrichment Analysis also varied dramatically by sampling time. Considered with other laboratory data, human genetic and epidemiology data, these findings further implicate circadian events in myopia pathogenesis. The present results emphasize a need to include time of day in mechanistic studies of myopia and to assess circadian biology directly in trying to understand better the origin of myopia and to develop more effective therapies.

Indexed as

MyopiaRetinaAnimalsBiologyChickensChoroidCircadian RhythmGene ExpressionHumans

Identifiers

PMID38177383
PMCPMC10767138
OpenAlexW4390579753

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.