Evidence map›Paper›PMID 38177205›Full record

ArticleScientific reports2024

The mitochondrial DNA common deletion as a potential biomarker of cancer-associated fibroblasts from skin basal and squamous cell carcinomas.

Gabriele A Fontana, Michael R MacArthur, Nadezhda Rotankova, Michela Di Filippo, Hans-Dietmar Beer, Hailey L Gahlon

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Gabriele A FontanaDepartment of Health Sciences and Technology, ETH Zurich, 8092, Zurich, Switzerland.ORCID 0000-0001-7697-6833
Michael R MacArthurDepartment of Health Sciences and Technology, ETH Zurich, 8092, Zurich, Switzerland.ORCID 0000-0003-3593-6995
Nadezhda RotankovaDepartment of Health Sciences and Technology, ETH Zurich, 8092, Zurich, Switzerland.
Michela Di FilippoDepartment of Dermatology, University Hospital Zurich, 8952, Schlieren, Switzerland.ORCID 0000-0002-3507-8639
Hans-Dietmar BeerDepartment of Dermatology, University Hospital Zurich, 8952, Schlieren, Switzerland.ORCID 0000-0002-8085-713X
Hailey L GahlonDepartment of Health Sciences and Technology, ETH Zurich, 8092, Zurich, Switzerland. hailey.gahlon@hest.ethz.ch.ORCID 0000-0003-4388-2798
ETH Zurich · CHUniversity of Zurich · CH

Funding

Swiss National Science Foundation 185020
6 · The paper itself

Abstract

Cancer-associated fibroblasts (CAFs) are components of the tumor microenvironment and represent appealing therapeutic targets for translational studies. Conventional protein-based biomarkers for CAFs have been reported to be limited in their specificity, rendering difficult the identification of CAFs from normal fibroblasts (NFs) in clinical samples and dampening the development of CAF-targeted therapies to treat cancer. In this study, we propose the mitochondrial RNA and the mitochondrial DNA (mtDNA) common deletion (CD) as novel indicators of CAF identity. We found that cancer-activation correlated with decreased levels of the mtDNA CD, a condition not due to altered mitochondria count or cellular redox state, but potentially linked to the generalized overexpression of mtDNA maintenance genes in CAFs. Decreased mtDNA CD content in CAFs was associated with moderate to strong overexpression of mtDNA-encoded genes and to slightly improved mitochondrial function. We identified similar patterns of upregulation of mtDNA-encoded genes in independent single-cell RNA seq data obtained from squamous cell carcinoma (SCC) patients. By using the identified nucleic acids-based indicators, identification of CAFs from NFs could be improved, leading to potential therapeutic benefits in advancing translational and clinical studies.

Indexed as

Cancer-Associated FibroblastsCarcinoma, Squamous CellDNA, MitochondrialFibroblastsHumansSkinTumor MicroenvironmentDNA, Mitochondrial

Identifiers

PMID38177205
PMCPMC10766618
OpenAlexW4390589894

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.