Evidence map›Paper›PMID 38177118›Full record

ArticleNature communications2024

Helical reconstruction of VP39 reveals principles for baculovirus nucleocapsid assembly.

Friederike M C Benning, Simon Jenni, Coby Y Garcia, Tran H Nguyen, Xuewu Zhang, Luke H Chao

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Regulation ofViruses · 2025
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Friederike M C BenningDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, 02114, USA.ORCID 0000-0002-1002-4204
Simon JenniDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, 02115, USA.ORCID 0000-0001-5722-5890
Coby Y GarciaDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, 02114, USA.
Tran H NguyenDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, 02114, USA.ORCID 0009-0007-6084-3017
Xuewu ZhangDepartment of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX, 75390, USA.ORCID 0000-0002-3634-6711
Luke H ChaoDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, 02114, USA. chao@molbio.mgh.harvard.edu.ORCID 0000-0002-4849-4148
Harvard University · USMassachusetts General Hospital · USThe University of Texas Southwestern Medical Center · US

Funding

Transmembrane signaling mechanisms of plexin - SupplementR35GM130289 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Xuewu Zhang · 2019 to 2026
$3.6M
Probing structural and biophysical mechanisms of mitochondrial membrane ultrastructureR35GM142553 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI Luke H. Chao · 2021 to 2026
$2.6M
NIGMS NIH HHS R35 GM130289NIGMS NIH HHS R35 GM142553
6 · The paper itself

Abstract

Baculoviruses are insect-infecting pathogens with wide applications as biological pesticides, in vitro protein production vehicles and gene therapy tools. Its cylindrical nucleocapsid, which encapsulates and protects the circular double-stranded viral DNA encoding proteins for viral replication and entry, is formed by the highly conserved major capsid protein VP39. The mechanism for VP39 assembly remains unknown. We use electron cryomicroscopy to determine a 3.2 Å helical reconstruction of an infectious nucleocapsid of Autographa californica multiple nucleopolyhedrovirus, revealing how dimers of VP39 assemble into a 14-stranded helical tube. We show that VP39 comprises a distinct protein fold conserved across baculoviruses, which includes a Zinc finger domain and a stabilizing intra-dimer sling. Analysis of sample polymorphism shows that VP39 assembles in several closely-related helical geometries. This VP39 reconstruction reveals general principles for baculoviral nucleocapsid assembly.

Indexed as

BaculoviridaeNucleocapsidAnimalsCapsid ProteinsNucleocapsid ProteinsSpodopteraCapsid ProteinsNucleocapsid Proteins

Identifiers

PMID38177118
PMCPMC10767040
OpenAlexW4390583912

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.