Evidence map›Paper›PMID 38175238›Full record

ArticleApplied microbiology and biotechnology2024

Detecting and quantifying Veillonella by real-time quantitative PCR and droplet digital PCR.

Zanbo Ding, Jinghua Cui, Qun Zhang, Junxia Feng, Bing Du, Guanhua Xue, Chao Yan, Lin Gan, Zheng Fan, Yanling Feng and 13 more

Open access · goldAbstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 3 institutions in 1 country.

Zanbo Ding *College of Life Sciences, Northwest A&F University, Yangling, China.
Jinghua Cui *Department of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Qun ZhangDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Junxia FengDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Bing DuDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Guanhua XueDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Chao YanDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Lin GanDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Zheng FanDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Yanling FengDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Hanqing ZhaoDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Ziying XuDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Zihui YuDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Tongtong FuDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Rui ZhangDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Xiaohu CuiDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Ziyan TianDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Jinfeng ChenDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Yujie ChenDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Zhoufei LiDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China.
Xuemei ZhongGastroenterology Department, Children's Hospital of Capital Institute of Pediatrics, Beijing, China. zhongxuemei@shouer.com.cn.
Yanbing LinCollege of Life Sciences, Northwest A&F University, Yangling, China. linyb2004@nwsuaf.edu.cn.
Jing YuanDepartment of Bacteriology, Capital Institute of Pediatrics, Beijing, China. yuanjing6216@163.com.ORCID http://orcid.org/0000-0002-6939-9676
Capital Institute of Pediatrics · CNChildren's Hospital of Capital Institute of Pediatrics · CNNorth West Agriculture and Forestry University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Veillonella spp. are Gram-negative opportunistic pathogens present in the respiratory, digestive, and reproductive tracts of mammals. An abnormal increase in Veillonella relative abundance in the body is closely associated with periodontitis, inflammatory bowel disease, urinary tract infections, and many other diseases. We designed a pair of primers and a probe based on the 16S rRNA gene sequences of Veillonella and conducted real-time quantitative PCR (qPCR) and droplet digital PCR (ddPCR) to quantify the abundance of Veillonella in fecal samples. These two methods were tested for specificity and sensitivity using simulated clinical samples. The sensitivity of qPCR was 100 copies/μL, allowing for the accurate detection of a wide range of Veillonella concentrations from 10

Indexed as

Inflammatory Bowel DiseasesVeillonellaBiological AssayChildHumansMammalsReal-Time Polymerase Chain ReactionRNA, Ribosomal, 16SRNA, Ribosomal, 16SDroplet digital PCRInflammatory bowel diseaseQuantitative detectionReal-time quantitative PCRVeillonella

Identifiers

PMID38175238
PMCPMC13497974
OpenAlexW4390587423

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.