Evidence map›Paper›PMID 38172605›Full record

ArticleScientific reports2024

A transcriptomic analysis of skeletal muscle tissues reveals promising candidate genes and pathways accountable for different daily weight gain in Hanwoo cattle.

Sunirmal Sheet, Sun Sik Jang, Jae Hwan Kim, Woncheoul Park, Dahye Kim

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Genomic insights into the recent evolution and biodiversity of Italian sheep breeds.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Integration of Multiomics Data Reveals Selection Characteristics ofInternational journal of molecular sciences · 2025
    Article
  8. Article
  9. Article
  10. Estimation of Genetic Parameters of Early Growth Traits in Dumeng Sheep.Animals : an open access journal from MDPI · 2024
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Sunirmal SheetAnimal Genomics and Bioinformatics Division, Rural Development Administration, National Institute of Animal Science, Wanju, 55365, Republic of Korea.
Sun Sik JangHanwoo Research Institute, National Institute of Animal Science, RDA, Pyeongchang, 25342, Republic of Korea.
Jae Hwan KimAnimal Genomics and Bioinformatics Division, Rural Development Administration, National Institute of Animal Science, Wanju, 55365, Republic of Korea.
Woncheoul ParkAnimal Genomics and Bioinformatics Division, Rural Development Administration, National Institute of Animal Science, Wanju, 55365, Republic of Korea. wcpark1982@korea.kr.
Dahye KimAnimal Genomics and Bioinformatics Division, Rural Development Administration, National Institute of Animal Science, Wanju, 55365, Republic of Korea. dhkim0724@korea.kr.
Rural Development Administration · KRNational Institute of Animal Science · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cattle traits like average daily weight gain (ADG) greatly impact profitability. Selecting based on ADG considering genetic variability can lead to economic and genetic advancements in cattle breeding. This study aimed to unravel genetic influences on ADG variation in Hanwoo cattle at the skeletal muscle transcriptomic level. RNA sequencing was conducted on longissimus dorsi (LD), semimembranosus (SB), and psoas major (PM) muscles of 14 steers assigned to same feed, grouped by low (≤ 0.71 kg) and high (≥ 0.77 kg) ADG. At P ≤ 0.05 and log2fold > 1.5, the distinct pattern of gene expression was identified with 184, 172, and 210 differentially expressed genes in LD, SB, and PM muscles, respectively. Tissue-specific responses to ADG variation were evident, with myogenesis and differentiation associated JAK-STAT signaling pathway and prolactin signaling pathways enriched in LD and SB muscles, while adipogenesis-related PPAR signaling pathways were enriched in PM muscle. Key hub genes (AXIN2, CDKN1A, MYC, PTGS2, FZD5, SPP1) were upregulated and functionally significant in muscle growth and differentiation. Notably, DPP6, CDKN1A, and FZD5 emerged as possible candidate genes linked to ADG variation. These findings enhance our understanding of genetic factors behind ADG variation in Hanwoo cattle, illuminating skeletal muscle mechanisms influencing ADG.

Indexed as

Hamstring MusclesMuscle, SkeletalAnimalsCattleGene Expression ProfilingMusclesParaspinal MusclesWeight Gain

Identifiers

PMID38172605
PMCPMC10764957
OpenAlexW4390543840

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.