Evidence map›Paper›PMID 38172572›Full record

ArticleNature plants2024

Microtubule-associated phase separation of MIDD1 tunes cell wall spacing in xylem vessels in Arabidopsis thaliana.

Takeshi Higa, Saku T Kijima, Takema Sasaki, Shogo Takatani, Ryosuke Asano, Yohei Kondo, Mayumi Wakazaki, Mayuko Sato, Kiminori Toyooka, Taku Demura and 2 more

Abstract read
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In one paragraph

Article in Nature plants, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
15.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. Article
  6. Article
  7. Review
  8. An ABA-ROP toggle switch orchestrates xylem differentiation and cell wall patterning.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Article
  10. Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 1 country.

Takeshi HigaDepartment of Gene Function and Phenomics, National Institute of Genetics, Mishima, Japan.
Saku T Kijima *Department of Biological Science, Graduate School of Science, Nagoya University, Nagoya, Japan.
Takema Sasaki *Department of Biological Science, Graduate School of Science, Nagoya University, Nagoya, Japan.ORCID 0000-0002-7106-2546
Shogo Takatani *Department of Biological Science, Graduate School of Science, Nagoya University, Nagoya, Japan.
Ryosuke AsanoDepartment of Biological Science, Graduate School of Science, Nagoya University, Nagoya, Japan.
Yohei KondoQuantitative Biology Research Group, Exploratory Research Center on Life and Living Systems (ExCELLS), National Institutes of Natural Sciences, Okazaki, Japan.ORCID 0000-0002-2801-4522
Mayumi WakazakiRIKEN Center for Sustainable Resource Science, Yokohama, Japan.
Mayuko SatoRIKEN Center for Sustainable Resource Science, Yokohama, Japan.ORCID 0000-0002-9876-5612
Kiminori ToyookaRIKEN Center for Sustainable Resource Science, Yokohama, Japan.ORCID 0000-0002-6414-5191
Taku DemuraCenter for Digital Green-innovation, Nara Institute of Science and Technology, Ikoma, Japan.ORCID 0000-0002-2499-4738
Hiroo FukudaDepartment of Bioscience and Biotechnology, Faculty of Bioenvironmental Sciences, Kyoto University of Advanced Science, Kameoka, Japan.ORCID 0000-0002-7824-9266
Yoshihisa OdaDepartment of Biological Science, Graduate School of Science, Nagoya University, Nagoya, Japan. oda.yoshihisa.w5@f.mail.nagoya-u.ac.jp.ORCID 0000-0001-6934-4424
Nagoya University · JPRIKEN Center for Sustainable Resource Science · JPAkita Prefectural University · JPNara Institute of Science and Technology · JPNational Institute for Basic Biology · JPNational Institute of Genetics · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Properly patterned cell walls specify cellular functions in plants. Differentiating protoxylem and metaxylem vessel cells exhibit thick secondary cell walls in striped and pitted patterns, respectively. Cortical microtubules are arranged in distinct patterns to direct cell wall deposition. The scaffold protein MIDD1 promotes microtubule depletion by interacting with ROP GTPases and KINESIN-13A in metaxylem vessels. Here we show that the phase separation of MIDD1 fine-tunes cell wall spacing in protoxylem vessels in Arabidopsis thaliana. Compared with wild-type, midd1 mutants exhibited narrower gaps and smaller pits in the secondary cell walls of protoxylem and metaxylem vessel cells, respectively. Live imaging of ectopically induced protoxylem vessels revealed that MIDD1 forms condensations along the depolymerizing microtubules, which in turn caused massive catastrophe of microtubules. The MIDD1 condensates exhibited rapid turnover and were susceptible to 1,6-hexanediol. Loss of ROP abolished the condensation of MIDD1 and resulted in narrow cell wall gaps in protoxylem vessels. These results suggest that the microtubule-associated phase separation of MIDD1 facilitates microtubule arrangement to regulate the size of gaps in secondary cell walls. This study reveals a new biological role of phase separation in the fine-tuning of cell wall patterning.

Indexed as

ArabidopsisArabidopsis ProteinsCell WallMicrotubulesPhase SeparationXylemArabidopsis Proteins

Identifiers

PMID38172572
OpenAlexW4390571955

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.