Evidence map›Paper›PMID 38172437›Full record

ArticleNature neuroscience2024

The logic of recurrent circuits in the primary visual cortex.

Ian Antón Oldenburg, William D Hendricks, Gregory Handy, Kiarash Shamardani, Hayley A Bounds, Brent Doiron, Hillel Adesnik

Abstract read
In one paragraph

Article in Nature neuroscience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed.

  1. Article
  2. Tuft Dendrite Spikes Are Accompanied by Selective Input From Distinct Functional Networks.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. The Importance of Synchrony in the Neural Control of Movement.bioRxiv : the preprint server for biology · 2026
    Article
  8. Article
  9. Article
  10. Input-dependent directionality of interactions between cortical areas.bioRxiv : the preprint server for biology · 2026
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Millimeter-scale selective amplification in the developing visual cortex.bioRxiv : the preprint server for biology · 2026
    Article
  16. Article
  17. Review
  18. Chromatix: a differentiable, GPU-accelerated wave-optics library.bioRxiv : the preprint server for biology · 2026
    Article
  19. Article
  20. Functional reorganization of motor cortex connectivity during learning.bioRxiv : the preprint server for biology · 2026
    Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ian Antón Oldenburg *Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA. ian.oldenburg@rutgers.edu.ORCID http://orcid.org/0000-0002-7356-104X
William D Hendricks *Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.ORCID http://orcid.org/0000-0003-2841-577X
Gregory Handy *Department of Neurobiology and Statistics, University of Chicago, Chicago, IL, USA. ghandy@umn.edu.ORCID http://orcid.org/0000-0003-4432-080X
Kiarash ShamardaniDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.ORCID http://orcid.org/0000-0002-2548-705X
Hayley A BoundsThe Helen Wills Neuroscience Institute, University of California, Berkeley, Berkeley, CA, USA.
Brent DoironDepartment of Neurobiology and Statistics, University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-6916-5511
Hillel AdesnikDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA. hadesnik@berkeley.edu.ORCID http://orcid.org/0000-0002-3796-8643

Funding

Validating Theoretical Models with Neurophysiology and OptogeneticsU19NS107613 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MILLER, KENNETH D, SCANZIANI, MASSIMO · 2018 to 2022
$16.7M
Excitation and Inhibition in Neural Circuits of the Visual CortexR01EY023756 · NEI · UNIVERSITY OF CALIFORNIA BERKELEY · PI Hillel Adesnik · 2013 to 2026
$6.1M
High speed, high precision volumetric multiphoton neural controlUF1NS107574 · NINDS · UNIVERSITY OF CALIFORNIA BERKELEY · PI ADESNIK, HILLEL · 2018 to 2018
$5.1M
Mesoscale bidirectional two-photon holographic optogeneticsRF1NS128772 · NINDS · UNIVERSITY OF CALIFORNIA BERKELEY · PI ADESNIK, HILLEL · 2022 to 2022
$3.2M
High-throughput Physiological Micro-connectivity Mapping in VivoRF1MH120680 · NIMH · UNIVERSITY OF CALIFORNIA BERKELEY · PI ADESNIK, HILLEL · 2019 to 2021
$2.2M
Neuronal population dynamics within and across cortical areasR01EB026953 · NIBIB · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DOIRON, BRENT D., SMITH, MATTHEW A · 2018 to 2020
$1.0M
Editing the Neural Basis of PerceptionR00EY029758 · NEI · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI OLDENBURG, IAN ANTON · 2022 to 2024
$747k
Editing the Neural Basis of PerceptionK99EY029758 · NEI · UNIVERSITY OF CALIFORNIA BERKELEY · PI OLDENBURG, IAN ANTON · 2019 to 2021
$315k
Role of cortical interneurons in visual perceptionF32EY031977 · NEI · UNIVERSITY OF CALIFORNIA BERKELEY · PI HENDRICKS, WILLIAM DAVID · 2020 to 2022
$201k
NEI NIH HHS F32 EY031977NEI NIH HHS K99 EY029758NEI NIH HHS R00 EY029758NEI NIH HHS R01 EY023756NIBIB NIH HHS R01 EB026953NIMH NIH HHS RF1 MH120680NINDS NIH HHS RF1 NS128772NINDS NIH HHS U19 NS107613NINDS NIH HHS UF1 NS107574
6 · The paper itself

Abstract

Recurrent cortical activity sculpts visual perception by refining, amplifying or suppressing visual input. However, the rules that govern the influence of recurrent activity remain enigmatic. We used ensemble-specific two-photon optogenetics in the mouse visual cortex to isolate the impact of recurrent activity from external visual input. We found that the spatial arrangement and the visual feature preference of the stimulated ensemble and the neighboring neurons jointly determine the net effect of recurrent activity. Photoactivation of these ensembles drives suppression in all cells beyond 30 µm but uniformly drives activation in closer similarly tuned cells. In nonsimilarly tuned cells, compact, cotuned ensembles drive net suppression, while diffuse, cotuned ensembles drive activation. Computational modeling suggests that highly local recurrent excitatory connectivity and selective convergence onto inhibitory neurons explain these effects. Our findings reveal a straightforward logic in which space and feature preference of cortical ensembles determine their impact on local recurrent activity.

Indexed as

NeuronsPrimary Visual CortexAnimalsMicePhotic StimulationSynapsesVisual Perception

Identifiers

PMID38172437
PMCPMC10774145

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.