Evidence map›Paper›PMID 38170080›Full record

ArticleiScience2024

Villin headpiece unfolding upon binding to boridene mediated by the "anchoring-perturbation" mechanism.

Yuqi Luo, Zonglin Gu, Weihua Liao, Yiwen Huang, Jose Manuel Perez-Aguilar, Yanbo Luo, Longzhen Chen

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In one paragraph

Article in iScience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Yuqi LuoDepartment of Gastrointestinal and Hepatobiliary Surgery, Shenzhen Longhua District Central Hospital, No. 187, Guanlan Road, Longhua District, Shenzhen, Guangdong Province 518110, China.
Zonglin GuCollege of Physical Science and Technology, Yangzhou University, Jiangsu 225009, China.
Weihua LiaoDepartment of Radiology, Guangzhou Nansha District Maternal and Child Health Hospital, No. 103, Haibang Road, Nansha District, Guangzhou, Guangdong Province 511457, China.
Yiwen HuangDepartment of Emergency, Nansha Hospital, Guangzhou First People's Hospital, Guangzhou, Guangdong, China.
Jose Manuel Perez-AguilarSchool of Chemical Sciences, Meritorious Autonomous University of Puebla (BUAP), University City, Puebla 72570, Mexico.
Yanbo LuoDepartment of Gastrointestinal and Hepatobiliary Surgery, Shenzhen Longhua District Central Hospital, No. 187, Guanlan Road, Longhua District, Shenzhen, Guangdong Province 518110, China.
Longzhen ChenDepartment of Gastrointestinal and Hepatobiliary Surgery, Shenzhen Longhua District Central Hospital, No. 187, Guanlan Road, Longhua District, Shenzhen, Guangdong Province 518110, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We employ molecular dynamics (MD) simulations to investigate the influence of boridene on the behavior of a protein model, HP35, with the aim of assessing the potential biotoxicity of boridene. Our MD results reveal that HP35 can undergo unfolding via an "anchoring-perturbation" mechanism upon adsorption onto the boridene surface. Specifically, the third helix of HP35 becomes tightly anchored to the boridene surface through strong electrostatic interactions between the abundant molybdenum atoms on the boridene surface and the oxygen atoms on the HP35 backbone. Meanwhile, the first helix, experiencing continuous perturbation from the surrounding water solution over an extended period, suffers from potential breakage of hydrogen bonds, ultimately resulting in its unfolding. Our findings not only propose, for the first time to our knowledge, the "anchoring-perturbation" mechanism as a guiding principle for protein unfolding but also reveal the potential toxicity of boridene on protein structures.

Indexed as

BiomoleculesComputational molecular modellingProtein folding

Identifiers

PMID38170080
PMCPMC10758975

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.