Evidence map›Paper›PMID 38169910›Full record

ArticlePNAS nexus2024

Causalized convergent cross-mapping and its approximate equivalence with directed information in causality analysis.

Jinxian Deng, Boxin Sun, Norman Scheel, Alina B Renli, David C Zhu, Dajiang Zhu, Jian Ren, Tongtong Li, Rong Zhang

Abstract read
In one paragraph

Article in PNAS nexus, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Advances in causal discovery methods for ecological time series.Biological reviews of the Cambridge Philosophical Society · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jinxian DengDepartment of Electrical and Computer Engineering, Michigan State University, East Lansing, MI 48824, USA.
Boxin SunDepartment of Electrical and Computer Engineering, Michigan State University, East Lansing, MI 48824, USA.
Norman ScheelDepartment of Radiology, Michigan State University, East Lansing, MI 48824, USA.ORCID https://orcid.org/0000-0002-4641-7579
Alina B RenliDepartment of Neuroscience, Michigan State University, East Lansing, MI 48824, USA.
David C ZhuDepartment of Radiology, Michigan State University, East Lansing, MI 48824, USA.ORCID https://orcid.org/0000-0002-5264-0144
Dajiang ZhuDepartment of Computer Science and Engineering, University of Texas, Arlington, TX 76010, USA.
Jian RenDepartment of Electrical and Computer Engineering, Michigan State University, East Lansing, MI 48824, USA.ORCID https://orcid.org/0000-0001-7796-8501
Tongtong LiDepartment of Electrical and Computer Engineering, Michigan State University, East Lansing, MI 48824, USA.ORCID https://orcid.org/0000-0001-7506-5368
Rong ZhangInstitute for Exercise and Environmental Medicine, Texas Health Presbyterian Hospital Dallas, Dallas, TX 75231, USA.ORCID https://orcid.org/0000-0002-6534-5216

Funding

Research Education CoreP30AG024824 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Neil Alexander · 2004 to 2026
$29.2M
Research Education ComponentP30AG072931 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DOUGLAS C NOLL · 2021 to 2026
$26.5M
NIA NIH HHS P30 AG072931
6 · The paper itself

Abstract

Convergent cross-mapping (CCM) has attracted increased attention recently due to its capability to detect causality in nonseparable systems under deterministic settings, which may not be covered by the traditional Granger causality. From an information-theoretic perspective, causality is often characterized as the directed information (DI) flowing from one side to the other. As information is essentially nondeterministic, a natural question is: does CCM measure DI flow? Here, we first causalize CCM so that it aligns with the presumption in causality analysis-the future values of one process cannot influence the past of the other, and then establish and validate the approximate equivalence of causalized CCM (cCCM) and DI under Gaussian variables through both theoretical derivations and fMRI-based brain network causality analysis. Our simulation result indicates that, in general, cCCM tends to be more robust than DI in causality detection. The underlying argument is that DI relies heavily on probability estimation, which is sensitive to data size as well as digitization procedures; cCCM, on the other hand, gets around this problem through geometric cross-mapping between the manifolds involved. Overall, our analysis demonstrates that cross-mapping provides an alternative way to evaluate DI and is potentially an effective technique for identifying both linear and nonlinear causal coupling in brain neural networks and other settings, either random or deterministic, or both.

Identifiers

PMID38169910
PMCPMC10758925

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.