Evidence map›Paper›PMID 38169146›Full record

ArticlePlant biotechnology journal2024

Allelic variation of BBX24 is a dominant determinant controlling red coloration and dwarfism in pear.

Guangyan Yang, Manyi Sun, Lester Brewer, Zikai Tang, Niels Nieuwenhuizen, Janine Cooney, Shaozhuo Xu, Jiawen Sheng, Christelle Andre, Cheng Xue and 12 more

Abstract read
In one paragraph

Article in Plant biotechnology journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. A 32-bp deletion inHorticulture research · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Structural Variation and Its Roles in Plant Genomes.Plants (Basel, Switzerland) · 2026
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Genome-Wide Identification and Expression Analysis of theInternational journal of molecular sciences · 2025
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Guangyan Yang *State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, China.
Manyi Sun *State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, China.
Lester BrewerThe New Zealand Institute for Plant & Food Research Limited, Auckland, New Zealand.
Zikai TangState Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, China.
Niels NieuwenhuizenThe New Zealand Institute for Plant & Food Research Limited, Auckland, New Zealand.
Janine CooneyThe New Zealand Institute for Plant & Food Research Limited, Auckland, New Zealand.
Shaozhuo XuState Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, China.
Jiawen ShengState Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, China.
Christelle AndreThe New Zealand Institute for Plant & Food Research Limited, Auckland, New Zealand.
Cheng XueState Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an, China.
Ria RebstockThe New Zealand Institute for Plant & Food Research Limited, Auckland, New Zealand.
Bo YangThe New Zealand Institute for Plant & Food Research Limited, Auckland, New Zealand.
Wenjing ChangState Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, China.
Yueyuan LiuState Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, China.
Jiaming LiState Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, China.
Runze WangState Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, China.
Mengfan QinState Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, China.ORCID https://orcid.org/0000-0001-7065-2299
Cyril BrendoliseThe New Zealand Institute for Plant & Food Research Limited, Auckland, New Zealand.
Andrew C AllanThe New Zealand Institute for Plant & Food Research Limited, Auckland, New Zealand.
Richard V EspleyThe New Zealand Institute for Plant & Food Research Limited, Auckland, New Zealand.
Kui Lin-WangThe New Zealand Institute for Plant & Food Research Limited, Auckland, New Zealand.
Jun WuState Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, China.ORCID https://orcid.org/0000-0002-1566-5115

Funding

Jiangsu Agricultural Science and Technology Innovation Fund CX(22)3043The Earmarked fund for China Agriculture Research System CARS-28The National Key Research and Development Program 2022YFD1200503The National Natural Science Foundation of China 31820103012
6 · The paper itself

Abstract

Variation in anthocyanin biosynthesis in pear fruit provides genetic germplasm resources for breeding, while dwarfing is an important agronomic trait, which is beneficial to reduce the management costs and allow for the implementation of high-density cultivation. Here, we combined bulked segregant analysis (BSA), quantitative trait loci (QTL), and structural variation (SV) analysis to identify a 14-bp deletion which caused a frame shift mutation and resulted in the premature translation termination of a B-box (BBX) family of zinc transcription factor, PyBBX24, and its allelic variation termed PyBBX24

Indexed as

Plant ProteinsPyrusAllelesAnthocyaninsFruitGene Expression Regulation, PlantNicotianaPhenotypePigmentationPlants, Genetically ModifiedQuantitative Trait LociTranscription FactorsAnthocyaninsPlant ProteinsTranscription FactorsanthocyaninBBXdwarfismmutationpearQTL

Identifiers

PMID38169146
PMCPMC11123420

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.