Evidence map›Paper›PMID 38168607›Full record

ArticleNature plants2024

A conserved graft formation process in Norway spruce and Arabidopsis identifies the PAT gene family as central regulators of wound healing.

Ming Feng, Ai Zhang, Van Nguyen, Anchal Bisht, Curt Almqvist, Lieven De Veylder, Annelie Carlsbecker, Charles W Melnyk

Open access · hybridAbstract read
In one paragraph

Article in Nature plants, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
12.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. A Statistical Mechanics Model to Decode Tissue Crosstalk During Graft Formation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
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  8. The CiWOX13-CiWOX14 Complex RegulatesPlants (Basel, Switzerland) · 2026
    Article
  9. Review
  10. Identification and characterization of ninePlant signaling & behavior · 2025
    Article
  11. Article
  12. Drought Resistance Evaluation ofPlants (Basel, Switzerland) · 2025
    Article
  13. Article
  14. Article
  15. Review
  16. Horticulture research · 2025
    Article
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Ming Feng *Department of Plant Biology, Linnean Center for Plant Biology, Swedish University of Agricultural Sciences, Uppsala, Sweden.ORCID 0000-0002-1690-5651
Ai Zhang *Department of Plant Biology, Linnean Center for Plant Biology, Swedish University of Agricultural Sciences, Uppsala, Sweden.ORCID 0000-0002-8308-9973
Van NguyenDepartment of Organismal Biology, Physiological Botany, Evolutionary Biology Centre and Linnean Centre for Plant Biology, Uppsala University, Uppsala, Sweden.
Anchal BishtDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
Curt AlmqvistSkogforsk (The Forestry Research Institute of Sweden), Uppsala Science Park, Uppsala, Sweden.ORCID 0000-0001-5739-4854
Lieven De VeylderDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.ORCID 0000-0003-1150-4426
Annelie CarlsbeckerDepartment of Organismal Biology, Physiological Botany, Evolutionary Biology Centre and Linnean Centre for Plant Biology, Uppsala University, Uppsala, Sweden.ORCID 0000-0002-8450-3718
Charles W MelnykDepartment of Plant Biology, Linnean Center for Plant Biology, Swedish University of Agricultural Sciences, Uppsala, Sweden. charles.melnyk@slu.se.ORCID 0000-0003-3251-800X
Swedish University of Agricultural Sciences · SEGhent University · BEUppsala University · SEForestry Research Institute of Sweden · SE

Funding

EC | EC Seventh Framework Programm | FP7 Ideas: European Research Council (FP7-IDEAS-ERC - Specific Programme: "Ideas" Implementing the Seventh Framework Programme of the European Community for Research, Technological Development and Demonstration Activities (2007 to 2013)) GRASP-805094Knut och Alice Wallenbergs Stiftelse (Knut and Alice Wallenberg Foundation) 2016-0274Vetenskapsrådet (Swedish Research Council) 2017-00857
6 · The paper itself

Abstract

The widespread use of plant grafting enables eudicots and gymnosperms to join with closely related species and grow as one. Gymnosperms have dominated forests for over 200 million years, and despite their economic and ecological relevance, we know little about how they graft. Here we developed a micrografting method in conifers using young tissues that allowed efficient grafting with closely related species and between distantly related genera. Conifer graft junctions rapidly connected vasculature and differentially expressed thousands of genes including auxin and cell-wall-related genes. By comparing these genes to those induced during Arabidopsis thaliana graft formation, we found a common activation of cambium, cell division, phloem and xylem-related genes. A gene regulatory network analysis in Norway spruce (Picea abies) predicted that PHYTOCHROME A SIGNAL TRANSDUCTION 1 (PAT1) acted as a core regulator of graft healing. This gene was strongly up-regulated during both spruce and Arabidopsis grafting, and Arabidopsis mutants lacking PAT genes failed to attach tissues or successfully graft. Complementing Arabidopsis PAT mutants with the spruce PAT1 homolog rescued tissue attachment and enhanced callus formation. Together, our data show an ability for young tissues to graft with distantly related species and identifies the PAT gene family as conserved regulators of graft healing and tissue regeneration.

Indexed as

ArabidopsisPiceaGene Expression Regulation, PlantIndoleacetic AcidsPhloemXylemIndoleacetic Acids

Identifiers

PMID38168607
PMCPMC10808061
OpenAlexW4390501466

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.