Evidence map›Paper›PMID 38168280›Full record

ArticleResearch square2023

Understanding the role of Pax5 in development of taxane-resistant neuroendocrine like prostate cancers.

Samikshan Dutta, Sreyashi Bhattacharya, Hanna Harris, Ridwan Islam, Sanika Bodas, Navatha Polavaram, Juhi Mishra, Dipanwita Das, Parthasarathy Seshacharyulu, Achyuth Kalluchi and 8 more

Open access · greenAbstract readPreprint
In one paragraph

Article in Research square, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 4 countries.

Samikshan DuttaUNMC.
Sreyashi BhattacharyaUNMC.
Hanna HarrisUNMC.
Ridwan IslamUNMC.
Sanika BodasUNMC.
Navatha PolavaramUNMC.
Juhi MishraUNMC.
Dipanwita DasUNMC.
Parthasarathy SeshacharyuluUNMC.ORCID 0000-0002-2348-3901
Achyuth KalluchiUNMC.
Anirban PalUNMC.
Manish KohliUniversity of Utah.
Subodh Lele
Michael MudersRudolf Becker Laboratory for Prostate Cancer Research, Center of Pathology, University of Bonn Medical Center.
Surinder BatraUniversity of Nebraska Medical Center, Buffett Cancer Center, Eppley Institute for Research in Cancer and Allied Diseases.ORCID 0000-0001-9470-9317
Paramita GhoshUniversity of California Davis.ORCID 0000-0002-7304-2936
Kaustubh DattaUniversity of Nebraska at Medical center.ORCID 0000-0001-5940-6652
Michael RowleyUNMC.
University of Nebraska Medical Center · USCancer Research Institute of the Slovak Academy of Sciences · SKUniversity of Bonn · DEUniversity of Utah · US

Funding

Fine-Scale Genome Folding Relative to Transcription and LocationR35GM147467 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Michael Jordan Rowley · 2022 to 2026
$2.0M
Novel deregulated genes in the etiology and progression of human prostate cancerR01CA138791 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI BATRA, SURINDER K. · 2010 to 2014
$1.9M
Nuclear Neuropilin2: a novel molecular mediator for aggressive Prostate CancerR01CA239343 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI DATTA, KAUSTUBH · 2020 to 2024
$1.7M
Principals of Chromatin OrganizationR00GM127671 · NIGMS · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI ROWLEY, MICHAEL JORDAN · 2019 to 2021
$747k
Androgen Receptor-containing novel transcriptional complex for cancer-specific gene expression in therapy-resistant Prostate CancerR21CA241234 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI DUTTA, SAMIKSHAN · 2019 to 2020
$365k
NCI NIH HHS R01 CA138791NCI NIH HHS R01 CA239343NCI NIH HHS R21 CA241234NIGMS NIH HHS R00 GM127671NIGMS NIH HHS R35 GM147467
6 · The paper itself

Abstract

Resistance to the current Androgen Receptor Signaling Inhibitor (ARSI) therapies has led to higher incidences of therapy-induced neuroendocrine-like prostate cancer (t-NEPC). This highly aggressive subtype with predominant small cell-like characteristics is resistant to taxane chemotherapies and has a dismal overall survival. t-NEPCs are mostly treated with platinum-based drugs with a combination of etoposide or taxane and have less selectivity and high systemic toxicity, which often limit their clinical potential. During t-NEPC transformation, adenocarcinomas lose their luminal features and adopt neuro-basal characteristics. Whether the adaptive neuronal characteristics of t-NEPC are responsible for such taxane resistance remains unknown. Pathway analysis from patient gene-expression databases indicates that t-NEPC upregulates various neuronal pathways associated with enhanced cellular networks. To identify transcription factor(s) (TF) that could be important for promoting the gene expression for neuronal characters in t-NEPC, we performed ATAC-Seq, acetylated-histone ChIP-seq, and RNA-seq in our NE-like cell line models and analyzed the promoters of transcriptionally active and significantly enriched neuroendocrine-like (NE-like) cancer-specific genes. Our results indicate that Pax5 could be an important transcription factor for neuronal gene expression and specific to t-NEPC. Pathway analysis revealed that Pax5 expression is involved in axonal guidance, neurotransmitter regulation, and neuronal adhesion, which are critical for strong cellular communications. Further results suggest that depletion of Pax5 disrupts cellular interaction in NE-like cells and reduces surface growth factor receptor activation, thereby, sensitizing them to taxane therapies. Moreover, t-NEPC specific hydroxymethylation of Pax5 promoter CpG islands favors Pbx1 binding to induce Pax5 expression. Based on our study, we concluded that continuous exposure to ARSI therapies leads to epigenetic modifications and Pax5 activation in t-NEPC, which promotes the expression of genes necessary to adopt taxane-resistant NE-like cancer. Thus, targeting the Pax5 axis can be beneficial for reverting their taxane sensitivity.

Indexed as

ATAC-seqChIP-seqHistone acetylationNeuroendocrine prostate cancerPax5Pbx1

Identifiers

PMID38168280
PMCPMC10760218
OpenAlexW4389573213

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.