Evidence map›Paper›PMID 38168038›Full record

ArticleNature communications2024

Allosteric control of dynamin-related protein 1 through a disordered C-terminal Short Linear Motif.

Isabel Pérez-Jover, Kristy Rochon, Di Hu, Mukesh Mahajan, Pooja Madan Mohan, Isaac Santos-Pérez, Julene Ormaetxea Gisasola, Juan Manuel Martinez Galvez, Jon Agirre, Xin Qi and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. The intermediate filament protein GFAP regulates mitochondrial fission in astrocytes.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Conformational Rearrangement of Fission DSPs.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  5. Article
  6. Article
  7. Review
  8. Nanoscale dynamics of Dynamin 1 helices reveals squeeze-twist deformation mode critical for membrane fission.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Isabel Pérez-Jover *Department of Biochemistry and Molecular Biology, University of the Basque Country, 48940, Leioa, Spain.ORCID 0000-0002-0288-7931
Kristy Rochon *Department of Pharmacology, Case Western Reserve University School of Medicine, Cleveland, OH, 44106, USA.ORCID 0000-0001-5692-6046
Di Hu *Department of Physiology and Biophysics, Case Western Reserve University School of Medicine, Cleveland, OH, 44106, USA.ORCID 0000-0003-4047-7340
Mukesh MahajanDepartment of Physiology and Biophysics, Case Western Reserve University School of Medicine, Cleveland, OH, 44106, USA.ORCID 0000-0002-8153-7613
Pooja Madan MohanDepartment of Physiology and Biophysics, Case Western Reserve University School of Medicine, Cleveland, OH, 44106, USA.
Isaac Santos-PérezElectron Microscopy and Crystallography Center for Cooperative Research in Biosciences (CIC bioGUNE), Bizkaia Science and Technology, Park Bld 800, 48160-Derio, Bizkaia, Spain.
Julene Ormaetxea GisasolaDepartment of Biochemistry and Molecular Biology, University of the Basque Country, 48940, Leioa, Spain.
Juan Manuel Martinez GalvezDepartment of Biochemistry and Molecular Biology, University of the Basque Country, 48940, Leioa, Spain.
Jon AgirreYork Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, YO10 5DD, York, UK.ORCID 0000-0002-1086-0253
Xin QiDepartment of Physiology and Biophysics, Case Western Reserve University School of Medicine, Cleveland, OH, 44106, USA.ORCID 0000-0002-9578-3890
Jason A MearsDepartment of Pharmacology, Case Western Reserve University School of Medicine, Cleveland, OH, 44106, USA.
Anna V ShnyrovaDepartment of Biochemistry and Molecular Biology, University of the Basque Country, 48940, Leioa, Spain. anna.shnyrova@ehu.eus.ORCID 0000-0002-5329-348X
Rajesh RamachandranDepartment of Physiology and Biophysics, Case Western Reserve University School of Medicine, Cleveland, OH, 44106, USA. rxr275@case.edu.ORCID 0000-0002-4645-2841
University School · USUniversity of the Basque Country · ESCase Western Reserve University · USEuskadiko Parke Teknologikoa · ESUniversity of York · GB

Funding

XRAY CRYSTALLOGRAPHIC STRUCTURE ANALYSIS: PROTEIN SORTINGP41RR001081 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 1985 to 2011
$17.6M
The Biophysics Collaborative Access Team (User Training and Outreach)P30GM138395 · NIGMS · ILLINOIS INSTITUTE OF TECHNOLOGY · PI THOMAS C IRVING · 2021 to 2026
$16.5M
Mechanism of white matter pathology in Alzheimer's diseaseR01AG076051 · NIA · CASE WESTERN RESERVE UNIVERSITY · PI XIN QI · 2022 to 2026
$3.0M
Role of brain lipid metabolism in Alzheimer's diseaseR01AG065240 · NIA · CASE WESTERN RESERVE UNIVERSITY · PI QI, XIN · 2020 to 2024
$3.0M
Supplement: Defining Molecular Interactions that Drive Mitochondrial FissionR01GM125844 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI Jason Mears · 2018 to 2026
$2.8M
Proteostasis dysregulation and alpha-synucleinR01NS115903 · NINDS · CASE WESTERN RESERVE UNIVERSITY · PI QI, XIN · 2020 to 2023
$2.4M
Regulation of CHCHD6 in Alzheimer's diseaseRF1AG074346 · NIA · CASE WESTERN RESERVE UNIVERSITY · PI QI, XIN · 2022 to 2022
$2.1M
MOLECULAR MECHANISMS OF DYNAMIN-RELATED PROTEIN 1-MEDIATED MITOCHONDRIAL FISSIONR01GM121583 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI RAMACHANDRAN, RAJESH · 2017 to 2021
$1.8M
NCRR NIH HHS P41 RR001081NIA NIH HHS R01 AG065240NIA NIH HHS R01 AG076051NIA NIH HHS RF1 AG074346NIGMS NIH HHS P30 GM138395NIGMS NIH HHS R01 GM121583NIGMS NIH HHS R01 GM125844NINDS NIH HHS R01 NS115903US Department of Energy DE-AC02-06CH11357
6 · The paper itself

Abstract

The mechanochemical GTPase dynamin-related protein 1 (Drp1) catalyzes mitochondrial and peroxisomal fission, but the regulatory mechanisms remain ambiguous. Here we find that a conserved, intrinsically disordered, six-residue Short Linear Motif at the extreme Drp1 C-terminus, named CT-SLiM, constitutes a critical allosteric site that controls Drp1 structure and function in vitro and in vivo. Extension of the CT-SLiM by non-native residues, or its interaction with the protein partner GIPC-1, constrains Drp1 subunit conformational dynamics, alters self-assembly properties, and limits cooperative GTP hydrolysis, surprisingly leading to the fission of model membranes in vitro. In vivo, the involvement of the native CT-SLiM is critical for productive mitochondrial and peroxisomal fission, as both deletion and non-native extension of the CT-SLiM severely impair their progression. Thus, contrary to prevailing models, Drp1-catalyzed membrane fission relies on allosteric communication mediated by the CT-SLiM, deceleration of GTPase activity, and coupled changes in subunit architecture and assembly-disassembly dynamics.

Indexed as

DynaminsGTP PhosphohydrolasesHydrolysisMembrane FusionMitochondriaMitochondrial DynamicsMitochondrial ProteinsDynaminsGTP PhosphohydrolasesMitochondrial Proteins

Identifiers

PMID38168038
PMCPMC10761769
OpenAlexW4390509763

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.