Evidence map›Paper›PMID 38167913›Full record

ArticleNature communications2024

Role of UPF1-LIN28A interaction during early differentiation of pluripotent stem cells.

Seungwon Jung, Seung Hwan Ko, Narae Ahn, Jinsam Lee, Chang-Hwan Park, Jungwook Hwang

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Seungwon Jung *Graduate School of Biomedical Science & Engineering, Hanyang University, Seoul, Korea.
Seung Hwan Ko *Graduate School of Biomedical Science & Engineering, Hanyang University, Seoul, Korea.
Narae AhnGraduate School of Biomedical Science & Engineering, Hanyang University, Seoul, Korea.ORCID 0000-0002-6432-8078
Jinsam LeeGraduate School of Biomedical Science & Engineering, Hanyang University, Seoul, Korea.
Chang-Hwan ParkGraduate School of Biomedical Science & Engineering, Hanyang University, Seoul, Korea. chshpark@hanyang.ac.kr.ORCID 0000-0003-3510-9295
Jungwook HwangGraduate School of Biomedical Science & Engineering, Hanyang University, Seoul, Korea. jwhwang@hanyang.ac.kr.ORCID 0000-0002-2290-1649
Hanyang University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

UPF1 and LIN28A are RNA-binding proteins involved in post-transcriptional regulation and stem cell differentiation. Most studies on UPF1 and LIN28A have focused on the molecular mechanisms of differentiated cells and stem cell differentiation, respectively. We reveal that LIN28A directly interacts with UPF1 before UPF1-UPF2 complexing, thereby reducing UPF1 phosphorylation and inhibiting nonsense-mediated mRNA decay (NMD). We identify the interacting domains of UPF1 and LIN28A; moreover, we develop a peptide that impairs UPF1-LIN28A interaction and augments NMD efficiency. Transcriptome analysis of human pluripotent stem cells (hPSCs) confirms that the levels of NMD targets are significantly regulated by both UPF1 and LIN28A. Inhibiting the UPF1-LIN28A interaction using a CPP-conjugated peptide promotes spontaneous differentiation by repressing the pluripotency of hPSCs during proliferation. Furthermore, the UPF1-LIN28A interaction specifically regulates transcripts involved in ectodermal differentiation. Our study reveals that transcriptome regulation via the UPF1-LIN28A interaction in hPSCs determines cell fate.

Indexed as

Pluripotent Stem CellsRNA HelicasesCell DifferentiationHumansNonsense Mediated mRNA DecayPeptidesRNA-Binding ProteinsTrans-ActivatorsLin28A protein, humanPeptidesRNA-Binding ProteinsRNA HelicasesTrans-ActivatorsUPF1 protein, human

Identifiers

PMID38167913
PMCPMC10762078
OpenAlexW4390510495

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.