Evidence map›Paper›PMID 38166654›Full record

ArticleBMC genomics2024

Genome-wide identification and expression analysis of the glycosyl hydrolase family 1 genes in Medicago sativa revealed their potential roles in response to multiple abiotic stresses.

Haiming Kong, Jiaxing Song, Shihai Ma, Jing Yang, Zitong Shao, Qian Li, Zhongxing Li, Zhiguo Xie, Peizhi Yang, Yuman Cao

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 24 citations in OpenAlex.

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  15. Unveiling the Role of β-Glucosidase Genes inInternational journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Haiming KongCollege of Grassland Agriculture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Jiaxing SongCollege of Grassland Agriculture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Shihai MaCollege of Grassland Agriculture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Jing YangCollege of Grassland Agriculture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Zitong ShaoCollege of Grassland Agriculture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Qian LiCollege of Grassland and Environment Sciences, Xinjiang Agricultural University, Urumqi, 830052, China.
Zhongxing LiCollege of Grassland Agriculture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Zhiguo XieShaanxi Academy of Forestry, Xi'an, 710082, China.
Peizhi YangCollege of Grassland Agriculture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Yuman CaoCollege of Grassland Agriculture, Northwest A&F University, Yangling, 712100, Shaanxi, China. yumancao@nwafu.edu.cn.
Northwest A&F University · CNShanxi Academy of Forestry · CNXinjiang Agricultural University · CN

Funding

China Agriculture Research System of MOF and MARA CARS-34Key Research and Development Projects of Shaanxi Province 2022ZDLNY01-07Ph.D. Start-up Fund of Northwest A&F University 2452021055Project of Science and Technology Innovation 2030 2022ZD04011
6 · The paper itself

Abstract

Glycoside hydrolase family 1 (GH1) β-glucosidases (BGLUs), are encoded by a large number of genes, which participate in the development and stress response of plants, particularly under biotic and abiotic stresses through the activation of phytohormones. However, there are few studies systematically analyzing stress or hormone-responsive BGLU genes in alfalfa. In this study, a total of 179 BGLU genes of the glycoside hydrolase family 1 were identified in the genome of alfalfa, and then were classified into five distinct clusters. Sequence alignments revealed several conserved and unique motifs among these MsBGLU proteins. Many cis-acting elements related to abiotic stresses and phytohormones were identified in the promoter of some MsBGLUs. Moreover, RNA-seq and RT-qPCR analyses showed that these MsBGLU genes exhibited distinct expression patterns in response to different abiotic stress and hormonal treatments. In summary, this study suggests that MsBGLU genes play crucial roles in response to various abiotic stresses and hormonal responses, and provides candidate genes for stress tolerance breeding in alfalfa.

Indexed as

Medicago sativaPlant Growth RegulatorsGene Expression Regulation, PlantGlycoside HydrolasesPhylogenyPlant BreedingPlant ProteinsStress, PhysiologicalGlycoside HydrolasesPlant Growth RegulatorsPlant ProteinsAbiotic stressAlfalfaExpression patternGene structureGenome-wideGH1 family

Identifiers

PMID38166654
PMCPMC10759430
OpenAlexW4390501834

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.