Evidence map›Paper›PMID 38165460›Full record

ArticleChromosoma2024

Dicentric chromosomes are resolved through breakage and repair at their centromeres.

Diana Cook, Stanislav G Kozmin, Elaine Yeh, Thomas D Petes, Kerry Bloom

Open access · hybridAbstract read
In one paragraph

Article in Chromosoma, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Diana CookDepartment of Biology, University of North Carolina Chapel Hill, Chapel Hill, NC, 27599-3280, USA.
Stanislav G KozminDepartment of Molecular Genetics & Microbiology, Duke University School of Medicine, Durham, NC, 27710, USA.
Elaine YehDepartment of Biology, University of North Carolina Chapel Hill, Chapel Hill, NC, 27599-3280, USA.
Thomas D PetesDepartment of Molecular Genetics & Microbiology, Duke University School of Medicine, Durham, NC, 27710, USA.
Kerry BloomDepartment of Biology, University of North Carolina Chapel Hill, Chapel Hill, NC, 27599-3280, USA. Kerry_bloom@unc.edu.ORCID 0000-0002-3457-004X
University of North Carolina at Chapel Hill · USDuke University · US

Funding

Genetic regulation of genome stability in yeastR35GM118020 · NIGMS · DUKE UNIVERSITY · PI PETES, THOMAS · 2016 to 2025
$7.0M
Structure and Function of a Eukaryotic CentromereR01GM032238 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BLOOM, KERRY S · 1985 to 2025
$6.2M
NIGMS NIH HHS R01 GM032238NIGMS NIH HHS R35 GM118020
6 · The paper itself

Abstract

Chromosomes with two centromeres provide a unique opportunity to study chromosome breakage and DNA repair using completely endogenous cellular machinery. Using a conditional transcriptional promoter to control the second centromere, we are able to activate the dicentric chromosome and follow the appearance of DNA repair products. We find that the rate of appearance of DNA repair products resulting from homology-based mechanisms exceeds the expected rate based on their limited centromere homology (340 bp) and distance from one another (up to 46.3 kb). In order to identify whether DNA breaks originate in the centromere, we introduced 12 single-nucleotide polymorphisms (SNPs) into one of the centromeres. Analysis of the distribution of SNPs in the recombinant centromeres reveals that recombination was initiated with about equal frequency within the conserved centromere DNA elements CDEII and CDEIII of the two centromeres. The conversion tracts range from about 50 bp to the full length of the homology between the two centromeres (340 bp). Breakage and repair events within and between the centromeres can account for the efficiency and distribution of DNA repair products. We propose that in addition to providing a site for kinetochore assembly, the centromere may be a point of stress relief in the face of genomic perturbations.

Indexed as

CentromereChromosome BreakageDNA RepairAnimalsHumansPolymorphism, Single NucleotideCentromereChromosome breakageDicentric chromosomeDNA repairRecombination

Identifiers

PMID38165460
PMCPMC11180013
OpenAlexW4390501169

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.