Evidence map›Paper›PMID 38164943›Full record

ArticleCell cycle (Georgetown, Tex.)

Identification of molecular subtypes and prognostic model to reveal immune infiltration and predict prognosis based on immunogenic cell death-related genes in lung adenocarcinoma.

Yinying Dong, Xiao Yu, Hao Song, Qingfeng Chen, Bin Zheng, Xiaomeng Ji, Mingjin Xu, Jian Liu, Xiangyin Sun, Qiuxiao Wang and 2 more

Open access · greenAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Yinying DongDepartment of Radiation Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Xiao YuDepartment of Gynecology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Hao SongDepartment of Radiation Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Qingfeng ChenBreast Disease Diagnosis and Treatment Center, The Affiliated Hospital of Qingdao University, Qingdao, China.
Bin ZhengDepartment of Neurosurgery, The Second Affiliated Hospital of Shandong First Medical University, Taian, Shandong, China.
Xiaomeng JiDepartment of Radiation Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Mingjin XuDepartment of Radiation Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Jian LiuDepartment of Neurology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Xiangyin SunDepartment of Radiation Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Qiuxiao WangDepartment of Radiation Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Ruimei RenDepartment of Radiation Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Haijun LuDepartment of Radiation Oncology, The Affiliated Hospital of Qingdao University, Qingdao, China.
Qingdao University · CNAffiliated Hospital of Qingdao University · CNShandong First Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Immunogenic cell death (ICD) has been increasingly indicated to be related to caners. However, ICD's role in Lung adenocarcinoma (LUAD) is still not well investigated. Clinical data along with associated mRNA expression profiles from LUAD cases were collected in TCGA and GEO databases. 13 ICD-related genes were identified. Relations of ICD-related genes expression with prognosis of patients, tumor immune microenvironment (TIME) was analyzed. Then, candidate genes were identified and the prognostic signature were constructed. Afterwards, one nomogram incorporating those chosen clinical data together with risk scores were built. Finally, the effect of HSP90AA1, one gene of the prognostic signature, on LUAD cell were analyzed. Two clusters were identified, which were designated as the ICD-high or -low subtype according to ICD-related genes levels. ICD-high subgroup showed good prognosis, high immune cell infiltration degrees, and enhanced immune response signaling activity compared with ICD-low subtype. Moreover, we established and verified the risk signature based on ICD-related genes. High risk group predicted poor prognosis of LUAD independently and presented negative association with immune score and immune status. Furthermore, nomogram contributed to the accurate prediction of LUAD prognostic outcome. Finally, HSP90AA1 levels were remarkably elevated within tumor cells in comparison with healthy pulmonary epithelial cells. HSP90α, HSP90AA1 protein product, promoted growth, migration, and invasion of LUAD cells. Molecular subtypes and prognostic model were identified by incorporating ICD-related genes, and it was related to TIME and might be adopted for the accurate prediction of LUAD prognosis.

Indexed as

Adenocarcinoma of LungLung NeoplasmsEpithelial CellsHumansImmunogenic Cell DeathPrognosisTumor MicroenvironmentHSP90AA1Immunogenic cell deathlung adenocarcinoma

Identifiers

PMID38164943
PMCPMC10936658
OpenAlexW4390500134

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.