Evidence map›Paper›PMID 38164756›Full record

ArticleJournal for immunotherapy of cancer2023

Discovery of U2AF1 neoantigens in myeloid neoplasms.

Melinda Ann Biernacki, Jessica Lok, Ralph Graeme Black, Kimberly A Foster, Carrie Cummings, Kyle B Woodward, Tim Monahan, Vivian G Oehler, Derek L Stirewalt, David Wu and 3 more

Open access · goldAbstract read
In one paragraph

Article in Journal for immunotherapy of cancer, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 16 citations in OpenAlex.

  1. The cellular landscape of druggable RNA-binding proteins.Nature reviews. Drug discovery · 2026
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  13. MutatedFrontiers in immunology · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Melinda Ann BiernackiTranslational Sciences and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA mbiernac@fredhutch.org.ORCID 0000-0002-9527-0905
Jessica LokTranslational Sciences and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Ralph Graeme BlackTranslational Sciences and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Kimberly A FosterDepartment of Immunology, University of Washington, Seattle, Washington, USA.
Carrie CummingsTranslational Sciences and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Kyle B WoodwardTranslational Sciences and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Tim MonahanTranslational Sciences and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Vivian G OehlerTranslational Sciences and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Derek L StirewaltTranslational Sciences and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
David WuDepartment of Laboratory Medicine and Pathology, University of Washington, Seattle, Washington, USA.
Anthony RongvauxTranslational Sciences and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Hans Joachim DeegTranslational Sciences and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
Marie BleakleyTranslational Sciences and Therapeutics Division, Fred Hutchinson Cancer Center, Seattle, Washington, USA.
University of Washington · USFred Hutch Cancer Center · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
NCI NIH HHS P30 CA015704
6 · The paper itself

Abstract

backgroundMyelodysplastic syndromes (MDS) arise from somatic mutations acquired in hematopoietic stem and progenitor cells, causing cytopenias and predisposing to transformation into secondary acute myeloid leukemia (sAML). Recurrent mutations in spliceosome genes, including

methodsWe identified candidate neoantigen epitopes from recurrent protein-coding mutations in the spliceosome genes

resultsWe identified two neoantigens created from a recurrent mutation in

conclusionsThese data serve as proof-of-concept for developing precision medicine approaches that use neoantigen-directed T-cell receptor-transduced T cells to treat MDS and sAML.

Indexed as

Leukemia, Myeloid, AcuteMyelodysplastic SyndromesAnimalsAntigens, NeoplasmCD8-Positive T-LymphocytesEpitopesHumansMiceReceptors, Antigen, T-CellSplicing Factor U2AFAntigens, NeoplasmEpitopesReceptors, Antigen, T-CellSplicing Factor U2AFU2AF1 protein, humanAntigens, NeoplasmHematologic NeoplasmsImmunotherapy, Adoptive

Identifiers

PMID38164756
PMCPMC10729103
OpenAlexW4389683930

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.