Evidence map›Paper›PMID 38163888›Full record

ArticleBMC plant biology2024

Systematic analysis of Heat Shock Protein 70 (HSP70) gene family in radish and potential roles in stress tolerance.

Xiaoxue Pan, Yang Zheng, Kairong Lei, Weilin Tao, Na Zhou

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  9. Molecular Mechanisms of Cadmium Stress Resistance in Vegetable Crops.International journal of molecular sciences · 2025
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  11. Transcriptomic Analysis of the CAM SpeciesPlants (Basel, Switzerland) · 2024
    Article
  12. Article
  13. Enhanced HSP70 binding to mBMC plant biology · 2024
    Article
  14. Article
  15. Article
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Xiaoxue PanBiotechnology Research Institute, Chongqing Academy of Agricultural Sciences/Chongqing Key Laboratory of Adversity Agriculture, Chongqing, 401329, China.
Yang ZhengVegetable and Flower Research Institute, Chongqing Academy of Agricultural Sciences, Chongqing, 401329, China.
Kairong LeiBiotechnology Research Institute, Chongqing Academy of Agricultural Sciences/Chongqing Key Laboratory of Adversity Agriculture, Chongqing, 401329, China.
Weilin TaoVegetable and Flower Research Institute, Chongqing Academy of Agricultural Sciences, Chongqing, 401329, China.
Na ZhouVegetable and Flower Research Institute, Chongqing Academy of Agricultural Sciences, Chongqing, 401329, China. 917742415@qq.com.
Chongqing Academy of Agricultural Sciences · CNMinistry of Agriculture and Rural Affairs · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The 70 kD heat shock proteins (HSP70s) represent a class of molecular chaperones that are widely distributed in all kingdoms of life, which play important biological roles in plant growth, development, and stress resistance. However, this family has not been systematically characterized in radish (Raphanus sativus L.). In this study, we identified 34 RsHSP70 genes unevenly distributed within nine chromosomes of R. sativus. Phylogenetic and multiple sequence alignment analyses classified the RsHSP70 proteins into six distinct groups (Group A-F). The characteristics of gene structures, motif distributions, and corresponding cellular compartments were more similar in closely linked groups. Duplication analysis revealed that segmental duplication was the major driving force for the expansion of RsHSP70s in radish, particularly in Group C. Synteny analysis identified eight paralogs (Rs-Rs) in the radish genome and 19 orthologs (Rs-At) between radish and Arabidopsis, and 23 orthologs (Rs-Br) between radish and Chinese cabbage. RNA-seq analysis showed that the expression change of some RsHSP70s were related to responses to heat, drought, cadmium, chilling, and salt stresses and Plasmodiophora brassicae infection, and the expression patterns of these RsHSP70s were significantly different among 14 tissues. Furthermore, we targeted a candidate gene, RsHSP70-23, the product of which is localized in the cytoplasm and involved in the responses to certain abiotic stresses and P. brassicae infection. These findings provide a reference for further molecular studies to improve yield and stress tolerance of radish.

Indexed as

ArabidopsisRaphanusGene Expression Regulation, PlantGenome, PlantHSP70 Heat-Shock ProteinsPhylogenyPlant ProteinsStress, PhysiologicalSyntenyHSP70 Heat-Shock ProteinsPlant ProteinsAbiotic stressesExpression patternsHSP70 family genesPlasmodiophora brassicaeRaphanus sativus

Identifiers

PMID38163888
PMCPMC10759535
OpenAlexW4390507757

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.