Evidence map›Paper›PMID 38163080›Full record

ArticleFrontiers in microbiology2023

Microbial communities of a variety of 75 homemade fermented vegetables.

Anne Thierry, Marie-Noelle Madec, Victoria Chuat, Anne-Sophie Bage, Olivier Picard, Cécile Grondin, Olivier Rué, Mahendra Mariadassou, Laurent Marché, Florence Valence

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 1 country.

Anne ThierryINRAE, Institut Agro, UMR STLO, Rennes, France.
Marie-Noelle MadecINRAE, Institut Agro, UMR STLO, Rennes, France.
Victoria ChuatINRAE, Institut Agro, UMR STLO, Rennes, France.
Anne-Sophie BageINRAE, Institut Agro, UMR STLO, Rennes, France.
Olivier PicardINRAE, Institut Agro, UMR STLO, Rennes, France.
Cécile GrondinINRAE, Université de Montpellier, Institut Agro, URM SPO, Montpellier, France.
Olivier RuéUniversité Paris-Saclay, INRAE, MaIAGE, Jouy-en-Josas, France.
Mahendra MariadassouUniversité Paris-Saclay, INRAE, MaIAGE, Jouy-en-Josas, France.
Laurent MarchéINRAE, UA1194, Jouy-en-Josas, France.
Florence ValenceINRAE, Institut Agro, UMR STLO, Rennes, France.
Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FRLaboratoire Science & technologie du Lait & de l'œuf · FRCentre Île-de-France - Jouy-en-Josas - Antony · FRInstitut Agro Montpelier · FRMathématiques et Informatique Appliquées du Génome à l'Environnement · FRUniversité Paris-Saclay · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fermentation is an ancient practice of food preservation. Fermented vegetables are popular in Eastern European and Asian countries. They have received a growing interest in Western countries, where they are mainly manufactured at domestic and artisanal scales and poorly characterized. Our aim was to investigate the microbial communities and the safety of French homemade fermented vegetables, in the frame of a citizen science project. Fermented vegetables and the data associated with their manufacture were collected from citizens and characterized for pH, NaCl concentration, and microbiology by culturomics and 16S DNA metabarcoding analysis. Lactic acid bacteria (LAB) and yeast isolates were identified by 16S rRNA gene sequencing and D1/D2 domains of the large subunit of the rRNA gene, respectively. The 75 collected samples contained 23 types of vegetables, mainly cabbage, followed by carrots and beets, and many mixtures of vegetables. They were 2 weeks to 4 years old, and their median pH was 3.56, except for two samples with a pH over 4.5. LAB represented the dominant viable bacteria. LAB concentrations ranged from non-detectable values to 8.7 log colony-forming units (CFU)/g and only depended on the age of the samples, with the highest most frequently observed in the youngest samples (<100 days). The 93 LAB isolates identified belonged to 23 species, the two mains being

Indexed as

citizen sciencefermented foodlactic acid bacteriasauerkrautspontaneous fermentationyeast

Identifiers

PMID38163080
PMCPMC10757351
OpenAlexW4389787151

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.