Evidence map›Paper›PMID 38162289›Full record

ArticleInternational journal of genomics2023

Transcription Analysis of the

Ali Barani, Kamyar Beikverdi, Benyamin Mashhadi, Naeimeh Parsapour, Mohammad Rezaei, Pegah Javid, Mansoureh Azadeh

Open access · goldAbstract read
In one paragraph

Article in International journal of genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Advanced biomedical research · 2025
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Ali BaraniZist Fanavari Novin Biotechnology Institute, Isfahan, Iran.
Kamyar BeikverdiZist Fanavari Novin Biotechnology Institute, Isfahan, Iran.
Benyamin MashhadiZist Fanavari Novin Biotechnology Institute, Isfahan, Iran.
Naeimeh ParsapourZist Fanavari Novin Biotechnology Institute, Isfahan, Iran.
Mohammad RezaeiZist Fanavari Novin Biotechnology Institute, Isfahan, Iran.ORCID https://orcid.org/0000-0003-3888-5839
Pegah JavidZist Fanavari Novin Biotechnology Institute, Isfahan, Iran.
Mansoureh AzadehZist Fanavari Novin Biotechnology Institute, Isfahan, Iran.ORCID https://orcid.org/0000-0003-2031-4640
Agricultural Biotechnology Research Institute of Iran · IRUniversity of Pavia · ITUniversity of Milan · ITUniversity of Tehran · IRUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Gastric cancer (GC) is the second most frequent cause of cancer-related death worldwide and the fourth most common malignancy. Despite significant improvements in patient survival over the past few decades, the prognosis for patients with GC remains dismal because of the high recurrence rate. In this comprehensive system biology and experimental investigation, we aimed to find new novel diagnostic biomarkers of GC through a regulatory RNA interaction network. Methods: Gene expression, coexpression, and survival analyses were performed using microarray and RNAseq datasets (analyzed by RStudio, GEPIA2, and ENCORI). RNA interaction analysis was performed using miRWalk and ENCORI online databases. Gene set enrichment analysis (GSEA) was performed to find related signaling pathways of up- and downregulated genes in the microarray dataset. Gene ontology and pathway enrichment analysis were performed by the enrichr database. Protein interaction analysis was performed by STRING online database. Validation of expression and coexpression analyses was performed using a qRT-PCR experiment. Results: Based on bioinformatics analyses, Conclusion:

Identifiers

PMID38162289
PMCPMC10756743
OpenAlexW4390095033

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.