Evidence map›Paper›PMID 38160311›Full record

ArticlePacific Symposium on Biocomputing. Pacific Symposium on Biocomputing2024

intCC: An efficient weighted integrative consensus clustering of multimodal data.

Can Huang, Pei Fen Kuan

Abstract read
In one paragraph

Article in Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Can HuangDepartment of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY 11794, USA.
Pei Fen Kuan

Funding

A lifecourse approach to PTSD and cognitive aging: A cohort of 9/11 respondersR01AG049953 · NIA · STATE UNIVERSITY NEW YORK STONY BROOK · PI CLOUSTON, SEAN · 2015 to 2024
$11.0M
Changes in monocyte transcriptome as a predictor of cognitive decline in WTC responders: a longitudinal studyU01OH012257 · OH · STATE UNIVERSITY NEW YORK STONY BROOK · PI CLOUSTON, SEAN, KUAN, PEI-FEN · 2021 to 2023
$1.5M
Changes in monocyte small noncoding RNAs as a predictor of cognitive decline in mild cognitive impairment and Alzheimer's diseaseR21AG081480 · NIA · STATE UNIVERSITY NEW YORK STONY BROOK · PI KUAN, PEI-FEN · 2023 to 2024
$439k
NIA NIH HHS R01 AG049953NIA NIH HHS R21 AG081480NIOSH CDC HHS U01 OH011478NIOSH CDC HHS U01 OH012257NIOSH CDC HHS U01 OH012466
6 · The paper itself

Abstract

High throughput profiling of multiomics data provides a valuable resource to better understand the complex human disease such as cancer and to potentially uncover new subtypes. Integrative clustering has emerged as a powerful unsupervised learning framework for subtype discovery. In this paper, we propose an efficient weighted integrative clustering called intCC by combining ensemble method, consensus clustering and kernel learning integrative clustering. We illustrate that intCC can accurately uncover the latent cluster structures via extensive simulation studies and a case study on the TCGA pan cancer datasets. An R package intCC implementing our proposed method is available at https://github.com/candsj/intCC.

Indexed as

Computational BiologyNeoplasmsAlgorithmsCluster AnalysisConsensusHumans

Identifiers

PMID38160311
PMCPMC10764072

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.