Evidence map›Paper›PMID 38158065›Full record

ArticleInternational journal of biological macromolecules2024

Overlapping characteristics of weak interactions of two transcriptional regulators with WDR5.

Mohammad Ahmad, Ali Imran, Liviu Movileanu

Open access · greenAbstract read
In one paragraph

Article in International journal of biological macromolecules, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.9field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Mohammad AhmadDepartment of Physics, Syracuse University, 201 Physics Building, Syracuse, NY 13244-1130, USA.
Ali ImranDepartment of Physics, Syracuse University, 201 Physics Building, Syracuse, NY 13244-1130, USA.
Liviu MovileanuDepartment of Physics, Syracuse University, 201 Physics Building, Syracuse, NY 13244-1130, USA; Department of Biomedical and Chemical Engineering, Syracuse University, 329 Link Hall, Syracuse, NY 13244, USA; The BioInspired Institute, Syracuse University, Syracuse, NY 13244, USA. Electronic address: lmovilea@syr.edu.
Syracuse University · US

Funding

Engineered Nanopores for Single-Molecule Stochastic SensingR01GM088403 · NIGMS · SYRACUSE UNIVERSITY · PI MOVILEANU, LIVIU · 2009 to 2022
$3.8M
Generalizable Nanosensors for Probing Highly Specific Interactions of Protein KinasesR01GM151299 · NIGMS · SYRACUSE UNIVERSITY · PI LIVIU MOVILEANU · 2023 to 2026
$1.6M
Development of Modular Synthetic Sensors for Protein Biomarker DetectionR01EB033412 · NIBIB · SYRACUSE UNIVERSITY · PI LIVIU MOVILEANU · 2023 to 2026
$1.4M
NIBIB NIH HHS R01 EB033412NIGMS NIH HHS R01 GM088403NIGMS NIH HHS R01 GM151299
6 · The paper itself

Abstract

The WD40 repeat protein 5 (WDR5) is a nuclear hub that critically influences gene expression by interacting with transcriptional regulators. Utilizing the WDR5 binding motif (WBM) site, WDR5 interacts with the myelocytomatosis (MYC), an oncoprotein transcription factor, and the retinoblastoma-binding protein 5 (RbBP5), a scaffolding element of an epigenetic complex. Given the clinical significance of these protein-protein interactions (PPIs), there is a pressing necessity for a quantitative assessment of these processes. Here, we use biolayer interferometry (BLI) to examine interactions of WDR5 with consensus peptide ligands of MYC and RbBP5. We found that both interactions exhibit relatively weak affinities arising from a fast dissociation process. Remarkably, live-cell imaging identified distinctive WDR5 localizations in the absence and presence of full-length binding partners. Although WDR5 tends to accumulate within nucleoli, WBM-mediated interactions with MYC and RbBP5 require their localization outside nucleoli. We utilize fluorescence resonance energy transfer (FRET) microscopy to confirm these weak interactions through a low FRET efficiency of the MYC-WDR5 and RbBP5-WDR5 complexes in living cells. In addition, we evaluate the impact of peptide and small-molecule inhibitors on these interactions. These outcomes form a fundamental basis for further developments to clarify the multitasking role of the WBM binding site of WDR5.

Indexed as

Histone-Lysine N-MethyltransferasePeptidesBinding SitesTranscription FactorsHistone-Lysine N-MethyltransferasePeptidesTranscription FactorsBiolayer interferometryFluorescence resonance energy transferProtein-protein interactions

Identifiers

PMID38158065
PMCPMC10922662
OpenAlexW4390277796

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.