Evidence map›Paper›PMID 38156839›Full record

ArticleAsian Pacific journal of cancer prevention : APJCP2023

Methylation Status of CDH1 Gene in Gastric Biopsy Specimens and Its Association with H. Pylori Infection.

Karima Ali Hamid, Ryan Sidig Adam Abdalgalil, Yousif Abdelhameed Mohammed, Rania Mahgob, Khalid Abdelsamea Mohamedahmed, Bakri Yousif Mohamed Nour

Open access · goldAbstract read
In one paragraph

Article in Asian Pacific journal of cancer prevention : APJCP, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Karima Ali HamidDepartment of Histopathology and Cytopathology, Faculty of Medical Laboratory Sciences, University of Gezira, Wad Medani, Sudan.
Ryan Sidig Adam AbdalgalilDepartment of Histopathology and Cytopathology, Faculty of Medical Laboratory Sciences, University of Gezira, Wad Medani, Sudan.
Yousif Abdelhameed MohammedDepartment of Clinical Chemistry, Faculty of Medical Laboratory Sciences, University of Gezira, Wad Medani, Sudan.
Rania MahgobDepartment of Histopathology and Cytopathology, Faculty of Medical Laboratory Sciences, University of Gezira, Wad Medani, Sudan.
Khalid Abdelsamea MohamedahmedDepartment of Hematology and Immunology, Faculty of Medical Laboratory Sciences, University of Gezira, Wad Medani, Sudan.ORCID 0000-0001-7084-6106
Bakri Yousif Mohamed NourDepartment of Medical Parasitology, Faculty of Medical Laboratory Sciences, University of Gezira, Wad Medani, Sudan.
University of Gezira · SD

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHelicobacter pylori (H. pylori) have been accepted as having an etiologic role in gastro-duodenal diseases as chronic gastritis, peptic ulcer, and gastric carcinoma. Methylation of CGI has been correlated with the tumorigenic process since it can inactivate tumor suppressor genes. CDH1 is a tumor suppressor gene that encodes the E-cadherin protein, which is preserving cell-cell connections. Early stages of gastric carcinogenesis may be affected by the promoter methylation-mediated inactivation of this gene.

objectiveThis study aimed to investigate the methylation status of CDH1 using Methylation-Specific PCR (MSP) technique in clinical suspected patients with H. pylori infection who undergoing upper gastrointestinal endoscopy and correlated it with H. pylori detection by glmM PCR test.

methodsFifty gastric mucosal biopsies were selected from one hundred and five samples included in this study. The detection of H. pylori was performed with the PCR primers specific to glmM gene. Bisulfite modification was done and the methylation status of the CDH1 gene was detected using MSP reaction.

resultsH. pylori was detected in 36% (18/50) of study population using glmM gene PCR test, 89% (16/18) of H. pylori positive cases were CDH1 methylated  positive (chi-square, p-value=0.002). CDH1 methylation can be present in cancerous and noncancerous gastric mucosa, where 60% (18/30) of CDH1 methylation positive gastric mucosa showed gastritis as an endoscopy finding and gastric cancer in 6% (2/30). There was a significant correlation between and CDH1 methylation positive results and age group (P-value = 0.02). There was no significant correlation between CDH1 methylation positive results and participants gender (p-value=0.431) and clinical symptoms (all P-value > 0.05).

conclusionThis work suggested strong significance association between H. pylori infection and CDH1 methylation.

Indexed as

GastritisGastritis, AtrophicHelicobacter InfectionsHelicobacter pyloriStomach NeoplasmsAntigens, CDBiopsyCadherinsDNA MethylationGastric MucosaHumansTranscription FactorsAntigens, CDCadherinsCDH1 protein, humanTranscription FactorsCDH1 methylationGastric cancerH. pylori

Identifiers

PMID38156839
PMCPMC10909090
OpenAlexW4390399111

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.