Evidence map›Paper›PMID 38156558›Full record

ArticleBiology open2024

Necrosensor: a genetically encoded fluorescent sensor for visualizing necrosis in Drosophila.

Hiroshi Nishida, Antonio Bolea Albero, Kenta Onoue, Yuko Ikegawa, Shivakshi Sulekh, Ugurcan Sakizli, Yasuhiro Minami, Shigenobu Yonemura, Yu-Chiun Wang, Sa Kan Yoo

Open access · goldAbstract read
In one paragraph

Article in Biology open, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Hiroshi NishidaDivision of Cell Physiology, Graduate School of Medicine, Kobe University, Kobe, 650-0017, Japan.
Antonio Bolea AlberoLaboratory for Epithelial Morphogenesis, RIKEN BDR, Kobe, 650-0047, Japan.
Kenta OnoueLaboratory for Ultrastructural Research, RIKEN BDR, Kobe, 650-0047, Japan.
Yuko IkegawaLaboratory of Molecular Cell Biology and Development, Kyoto University, Kobe, 650-0047, Japan.ORCID 0000-0002-8956-0391
Shivakshi SulekhLaboratory for Homeodynamics, RIKEN BDR, Kobe, 650-0047, Japan.ORCID 0009-0001-3605-6394
Ugurcan SakizliLaboratory for Homeodynamics, RIKEN BDR, Kobe, 650-0047, Japan.
Yasuhiro MinamiDivision of Cell Physiology, Graduate School of Medicine, Kobe University, Kobe, 650-0017, Japan.
Shigenobu YonemuraLaboratory for Ultrastructural Research, RIKEN BDR, Kobe, 650-0047, Japan.
Yu-Chiun WangLaboratory for Epithelial Morphogenesis, RIKEN BDR, Kobe, 650-0047, Japan.
Sa Kan YooPhysiological Genetics Laboratory, RIKEN CPR, Kobe, 650-0047, Japan.ORCID 0000-0003-3358-4818
RIKEN Center for Biosystems Dynamics Research · JPKobe University · JPRIKEN · JPKyoto University · JP

Funding

AMED-PRIME 17939907Japan Society for the Promotion of Science JP16H06220Japan Society for the Promotion of Science JP22H02807JST FOREST JPMJFR216FRIKEN BDR Research Center
6 · The paper itself

Abstract

Historically, necrosis has been considered a passive process, which is induced by extreme stress or damage. However, recent findings of necroptosis, a programmed form of necrosis, shed a new light on necrosis. It has been challenging to detect necrosis reliably in vivo, partly due to the lack of genetically encoded sensors to detect necrosis. This is in stark contrast with the availability of many genetically encoded biosensors for apoptosis. Here we developed Necrosensor, a genetically encoded fluorescent sensor that detects necrosis in Drosophila, by utilizing HMGB1, which is released from the nucleus as a damage-associated molecular pattern (DAMP). We demonstrate that Necrosensor is able to detect necrosis induced by various stresses in multiple tissues in both live and fixed conditions. Necrosensor also detects physiological necrosis that occurs during spermatogenesis in the testis. Using Necrosensor, we discovered previously unidentified, physiological necrosis of hemocyte progenitors in the hematopoietic lymph gland of developing larvae. This work provides a new transgenic system that enables in vivo detection of necrosis in real time without any intervention.

Indexed as

Biosensing TechniquesDrosophilaAnimalsApoptosisMaleNecrosisSpermatogenesisCell deathDrosophilaIn vivoNecrosisNecrosis sensor

Identifiers

PMID38156558
PMCPMC10836653
OpenAlexW4390405437

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.