Evidence map›Paper›PMID 38155157›Full record

ArticleScientific reports2023

Changes of the bacterial composition in duodenal fluid from patients with liver cirrhosis and molecular bacterascites.

Jim Höppner, Sandra Krohn, Ellen H A van den Munckhof, René Kallies, Adam Herber, Katharina Zeller, Jan Tünnemann, Madlen Matz-Soja, Antonis Chatzinotas, Stephan Böhm and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Jim HöppnerDivision of Hepatology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany.
Sandra KrohnDivision of Hepatology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany.
Ellen H A van den MunckhofDDL Diagnostic Laboratory, Rijswijk, The Netherlands.
René KalliesDepartment of Environmental Microbiology, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.
Adam HerberDivision of Hepatology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany.
Katharina ZellerEndocrinology and Nephrology, University Hospital Leipzig, Leipzig, Germany.
Jan TünnemannDivision of Gastroenterology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany.
Madlen Matz-SojaDivision of Hepatology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany.
Antonis ChatzinotasDepartment of Environmental Microbiology, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.ORCID 0000-0002-0387-9802
Stephan BöhmMax von Pettenkofer-Institute for Hygiene and Clinical Microbiology, Ludwig Maximilians-University, Munich, Germany.
Albrecht HoffmeisterDivision of Gastroenterology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany.
Thomas BergDivision of Hepatology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany. thomas.berg@medizin.uni-leipzig.de.
Cornelius EngelmannDivision of Hepatology, Department of Medicine II, Leipzig University Medical Center, Leipzig, Germany.
Leipzig University · DEHelmholtz Centre for Environmental Research · DEDDL Diagnostic Laboratory · NLInstitute of Medical Microbiology and Hygiene · DEThe Royal Free Hospital · GBUniversity Hospital Leipzig · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Small intestinal bacterial overgrowth and compositional changes of intestinal microbiota are pathomechanistic factors in liver cirrhosis leading to bacterial translocation and infectious complications. We analyzed the quantity and composition of duodenal bacterial DNA (bactDNA) in relation to bactDNA in blood and ascites of patients with liver cirrhosis. Duodenal fluid and corresponding blood and ascites samples from 103 patients with liver cirrhosis were collected. Non-liver disease patients (n = 22) served as controls. BactDNA was quantified by 16S-rRNA gene-based PCR. T-RFLP and 16S-rRNA amplicon sequencing were used to analyze bacterial composition. Duodenal bacterial diversity in cirrhosis was distinct to controls showing significantly higher abundances of Streptococcus, Enterococcus and Veillonella. Patients with bactDNA positive ascites revealed reduced spectrum of core microbiota with Streptococcus as key player of duodenal community and higher prevalence of Granulicatella proving presence of cirrhosis related intestinal dysbiosis. Regarding duodenal fluid bactDNA quantification, no significant differences were found between patients with cirrhosis and controls. Additionally, percentage of subjects with detectable bactDNA in blood did not differ between patients and controls. This study evaluated the diversity of bacterial DNA in different body specimens with potential implications on understanding how intestinal bacterial translocation may affect infectious complications in cirrhosis.

Indexed as

AscitesAscitic FluidBacteriaDNA, BacterialFibrosisHumansLiver CirrhosisRNA, Ribosomal, 16SDNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID38155157
PMCPMC10754895
OpenAlexW4390346617

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.