Evidence map›Paper›PMID 38153939›Full record

ArticlePloS one2023

Species delimitation by DNA barcoding reveals undescribed diversity in Stelliferinae (Sciaenidae).

Tárcia Fernanda da Silva, Iracilda Sampaio, Arturo Angulo, Omar Domínguez-Domínguez, Jonas Andrade-Santos, Aurycéia Guimarães-Costa, Simoni Santos

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Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Tárcia Fernanda da SilvaLaboratory of Fish Microbiology, Institute of Coastal Studies, Federal University of Para (UFPA), Braganca, Para, Brazil.
Iracilda SampaioLaboratory of Evolution, Institute of Coastal Studies, Federal University of Para (UFPA), Braganca, Para, Brazil.
Arturo AnguloEscuela de Biología, Museo de Zoología/Centro de Investigación en Biodiversidad y Ecología Tropical (CIBET) and Centro de Investigación en Ciencias del Mar y Limnología (CIMAR), Universidad de Costa Rica, San Pedro de Montes de Oca, San José, Costa Rica.ORCID 0000-0002-4587-1446
Omar Domínguez-DomínguezLaboratory of Aquatic Biology, Faculty of Biology, Universidad Michoacana de San Nicolás de Hidalgo (UMSNH), Morella, Michoacán, Mexico.
Jonas Andrade-SantosLaboratory of Ichthyology, Vertebrates Department-Federal University of Rio de Janeiro, National Museum, Rio de Janeiro, Brazil.ORCID 0000-0001-9245-1121
Aurycéia Guimarães-CostaLaboratory of Evolution, Institute of Coastal Studies, Federal University of Para (UFPA), Braganca, Para, Brazil.
Simoni SantosLaboratory of Fish Microbiology, Institute of Coastal Studies, Federal University of Para (UFPA), Braganca, Para, Brazil.ORCID 0000-0001-7261-6793

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stelliferinae is the third most speciose subfamily of Sciaenidae, with 51 recognized species arranged in five genera. Phylogenies derived from both morphological and molecular data support the monophyly of this subfamily, although there is no general consensus on the intergeneric relationships or the species diversity of this group. We used the barcoding region of the cytochrome oxidase C subunit I (COI) gene to verify the delimitation of Stelliferinae species based on the Automatic Barcode Gap Discovery (ABGD), Generalized Mixed Yule Coalescence (GMYC), and Bayesian Poisson Tree Process (bPTP) methods. In general, the results of these different approaches were congruent, delimiting 30-32 molecular operational taxonomic units (MOTUs), most of which coincided with valid species. Specimens of Stellifer menezesi and Stellifer gomezi were attributed to a single species, which disagrees with the most recent review of this genus. The evidence also indicated that Odontoscion xanthops and Corvula macrops belong to a single MOTU. In contrast, evidence also indicates presence of distinct lineages in both Odontoscion dentex and Bairdiella chrysoura. Such results are compatible with the existence of cryptic species, which is supported by the genetic divergence and haplotype genealogy. Therefore, the results of the present study indicate the existence of undescribed diversity in the Stelliferinae, which reinforces the need for an ample taxonomic review of the fish in this subfamily.

Indexed as

DNA Barcoding, TaxonomicPerciformesAnimalsBayes TheoremDNAPhylogenyDNA

Identifiers

PMID38153939
PMCPMC10754464

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.