Evidence map›Paper›PMID 38153196›Full record

ArticleNucleic acids research2024

Harmonin homology domain-mediated interaction of RTEL1 helicase with RPA and DNA provides insights into its recruitment to DNA repair sites.

Niranjan Kumar, Arushi Taneja, Meenakshi Ghosh, Ulli Rothweiler, Nagalingam Ravi Sundaresan, Mahavir Singh

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Niranjan KumarMolecular Biophysics Unit, Indian Institute of Science, Bengaluru 560012, India.ORCID 0000-0003-0142-8925
Arushi TanejaDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bengaluru 560012, India.ORCID 0000-0002-2719-8067
Meenakshi GhoshMolecular Biophysics Unit, Indian Institute of Science, Bengaluru 560012, India.ORCID 0000-0003-0003-8917
Ulli RothweilerThe Norwegian Structural Biology Centre, Department of Chemistry, The Arctic University of Norway, N-9037, Tromsø, Norway.ORCID 0000-0003-2802-7558
Nagalingam Ravi SundaresanDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bengaluru 560012, India.ORCID 0000-0003-1770-5616
Mahavir SinghMolecular Biophysics Unit, Indian Institute of Science, Bengaluru 560012, India.ORCID 0000-0003-1251-8248
Indian Institute of Science Bangalore · INUiT The Arctic University of Norway · NO

Funding

Department of Biotechnology BT/PR15829/BRB/10/1469/2015Ramalingaswami Fellowship BT/RLF/Re-entry/23/2013Science and Engineering Research Board
6 · The paper itself

Abstract

The regulator of telomere elongation helicase 1 (RTEL1) plays roles in telomere DNA maintenance, DNA repair, and genome stability by dismantling D-loops and unwinding G-quadruplex structures. RTEL1 comprises a helicase domain, two tandem harmonin homology domains 1&2 (HHD1 and HHD2), and a Zn2+-binding RING domain. In vitro D-loop disassembly by RTEL1 is enhanced in the presence of replication protein A (RPA). However, the mechanism of RTEL1 recruitment at non-telomeric D-loops remains unknown. In this study, we have unravelled a direct physical interaction between RTEL1 and RPA. Under DNA damage conditions, we showed that RTEL1 and RPA colocalise in the cell. Coimmunoprecipitation showed that RTEL1 and RPA interact, and the deletion of HHDs of RTEL1 significantly reduced this interaction. NMR chemical shift perturbations (CSPs) showed that RPA uses its 32C domain to interact with the HHD2 of RTEL1. Interestingly, HHD2 also interacted with DNA in the in vitro experiments. HHD2 structure was determined using X-ray crystallography, and NMR CSPs mapping revealed that both RPA 32C and DNA competitively bind to HHD2 on an overlapping surface. These results establish novel roles of accessory HHDs in RTEL1's functions and provide mechanistic insights into the RPA-mediated recruitment of RTEL1 to DNA repair sites.

Indexed as

DNA HelicasesReplication Protein ATelomereDNADNA RepairDNA ReplicationHumansDNADNA HelicasesReplication Protein ARTEL1 protein, human

Identifiers

PMID38153196
PMCPMC10853778
OpenAlexW4390311654

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.