Evidence map›Paper›PMID 38150028›Full record

ArticlePlant cell reports2023

CstMYB1R1, a REVEILLE-8-like transcription factor, regulates diurnal clock-specific anthocyanin biosynthesis and response to abiotic stress in Crocus sativus L.

Zahid Yaqoob Bhat, Javid Ahmad Mir, Arvind Kumar Yadav, Deepika Singh, Nasheeman Ashraf

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Article in Plant cell reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Zahid Yaqoob BhatPlant Biotechnology Division, CSIR-Indian Institute of Integrative Medicine (IIIM), Sanat Nagar190005, Srinagar, Jammu and Kashmir, India.
Javid Ahmad MirPlant Biotechnology Division, CSIR-Indian Institute of Integrative Medicine (IIIM), Sanat Nagar190005, Srinagar, Jammu and Kashmir, India.
Arvind Kumar YadavQuality Control and Quality Assurance Lab, Quality, Management and Instrumentation Division, CSIR- Indian Institute of Integrative Medicine, Canal Road, Jammu Tawi, 180001, India.
Deepika SinghQuality Control and Quality Assurance Lab, Quality, Management and Instrumentation Division, CSIR- Indian Institute of Integrative Medicine, Canal Road, Jammu Tawi, 180001, India.
Nasheeman AshrafPlant Biotechnology Division, CSIR-Indian Institute of Integrative Medicine (IIIM), Sanat Nagar190005, Srinagar, Jammu and Kashmir, India. nashraf@iiim.res.in.ORCID http://orcid.org/0000-0002-7757-3064
Indian Institute of Integrative Medicine · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageCstMYB1R1 acts as a positive regulator of Crocus anthocyanin biosynthesis and abiotic stress tolerance which was experimentally demonstrated through molecular analysis and over-expression studies in Crocus and Nicotiana. Regulatory mechanics of flavonoid/anthocyanin biosynthesis in Crocus floral tissues along the diurnal clock has not been studied to date. MYB proteins represent the most dominant, functionally diverse and versatile type of plant transcription factors which regulate key metabolic and physiological processes in planta. Transcriptome analysis revealed that MYB family is the most dominant transcription factor family in C. sativus. Considering this, a MYB-related REVEILLE-8 type transcription factor, CstMYB1R1, was explored for its possible role in regulating Crocus flavonoid and anthocyanin biosynthetic pathway. CstMYB1R1 was highly expressed in Crocus floral tissues, particularly tepals and its expression was shown to peak at dawn and dusk time points. Anthocyanin accumulation also peaked at dawn and dusk and was minimum at night. Moreover, the diurnal expression pattern of CstMYB1R1 was shown to highly correlate with Crocus ANS/LDOX gene expression among the late anthocyanin pathway genes. CstMYB1R1 was shown to be nuclear localized and transcriptionally active. CstMYB1R1 over-expression in Crocus tepals enhanced anthocyanin levels and upregulated transcripts of Crocus flavonoid and anthocyanin biosynthetic pathway genes. Yeast one hybrid (Y1H) and GUS reporter assay confirmed that CstMYB1R1 interacts with the promoter of Crocus LDOX gene to directly regulate its transcription. In addition, the expression of CstMYB1R1 in Nicotiana plants significantly enhanced flavonoid and anthocyanin levels and improved their abiotic stress tolerance. The present study, thus, confirmed positive role of CstMYB1R1 in regulating Crocus anthocyanin biosynthetic pathway in a diurnal clock-specific fashion together with its involvement in the regulation of abiotic stress response.

Indexed as

CrocusAnthocyaninsFlavonoidsGene Expression RegulationNicotianaStress, PhysiologicalAnthocyaninsFlavonoidsAbiotic stressAnthocyaninsCircadian rhythmCrocus sativusMYB transcription factorsSecondary metabolism

Identifiers

PMID38150028
OpenAlexW4390272223

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.