Evidence map›Paper›PMID 38150000›Full record

ArticleeLife2023

Unveiling the domain-specific and RAS isoform-specific details of BRAF kinase regulation.

Tarah Elizabeth Trebino, Borna Markusic, Haihan Nan, Shrhea Banerjee, Zhihong Wang

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Long-term outcomes of cochlear implantation in children with cochlear nerve deficiency: auditory speech performance and predictive factors over 5 years.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2026
    Article
  7. Article
  8. Article
  9. Braf-Mutant Melanomas: Biology and Therapy.Current oncology (Toronto, Ont.) · 2024
    Review
  10. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Tarah Elizabeth TrebinoRowan University, Glassboro, United States.ORCID 0009-0008-6320-295X
Borna MarkusicRowan University, Glassboro, United States.ORCID 0009-0007-8302-812X
Haihan NanRowan University, Glassboro, United States.
Shrhea BanerjeeRowan University, Glassboro, United States.ORCID 0009-0001-2929-4490
Zhihong WangRowan University, Glassboro, United States.ORCID 0000-0003-1667-3536
Rowan University · USMax Planck Institute of Biophysics · DEWenzhou Medical University · CN

Funding

Activation and Regulation Mechanisms of the RAF Kinase FamilyR01GM138671 · NIGMS · UNIVERSITY OF THE SCIENCES PHILADELPHIA · PI WANG, ZHIHONG · 2021 to 2024
$1.3M
Activation and Regulation Mechanisms of the RAF Kinase FamilyR15GM128099 · NIGMS · UNIVERSITY OF THE SCIENCES PHILADELPHIA · PI WANG, ZHIHONG · 2018 to 2018
$413k
NIGMS NIH HHS R01 GM138671NIGMS NIH HHS R01GM138671NIGMS NIH HHS R15 GM128099NIGMS NIH HHS R15GM128099
6 · The paper itself

Abstract

BRAF is a key member in the MAPK signaling pathway essential for cell growth, proliferation, and differentiation. Mutant BRAF is often the underlying cause of various types of cancer and mutant RAS, the upstream regulator of BRAF, is a driver of up to one-third of all cancers. BRAF interacts with RAS and undergoes a conformational change from an inactive, autoinhibited monomer to an active dimer, which propagates downstream signaling. Because of BRAF's complex regulation mechanism, the exact order and magnitude of its activation steps have yet to be confirmed experimentally. By studying the inter- and intramolecular interactions of BRAF, we unveil the domain-specific and isoform-specific details of BRAF regulation through pulldown assays, open surface plasmon resonance (OpenSPR), and hydrogen-deuterium exchange mass spectrometry (HDX-MS). We demonstrate that the BRAF specific region (BSR) and cysteine rich domain (CRD) play a crucial role in regulating the activation of BRAF in a RAS isoform-specific manner. Moreover, we quantified the binding affinities between BRAF N-terminal and kinase domains (KD) to reveal their individual roles in autoinhibition. Our findings also indicate that oncogenic BRAF-KD

Indexed as

Biological AssayProto-Oncogene Proteins B-rafCell CycleCell DifferentiationProtein IsoformsProtein IsoformsProto-Oncogene Proteins B-rafbiochemistrychemical biologyE. coliMAPK signalingRAF kinaseRAS

Identifiers

PMID38150000
PMCPMC10752582
OpenAlexW4384264009

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.