Evidence map›Paper›PMID 38149246›Full record

ArticleFrontiers in immunology2023

Cellular and transcriptome signatures unveiled by single-cell RNA-Seq following

Venkatesh Kumaresan, Taylor MacMackin Ingle, Nathan Kilgore, Guoquan Zhang, Brian P Hermann, Janakiram Seshu

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Venkatesh KumaresanDepartment of Molecular Microbiology and Immunology, The University of Texas at San Antonio, San Antonio, TX, United States.
Taylor MacMackin IngleDepartment of Molecular Microbiology and Immunology, The University of Texas at San Antonio, San Antonio, TX, United States.
Nathan KilgoreDepartment of Molecular Microbiology and Immunology, The University of Texas at San Antonio, San Antonio, TX, United States.
Guoquan ZhangDepartment of Molecular Microbiology and Immunology, The University of Texas at San Antonio, San Antonio, TX, United States.
Brian P HermannDepartment of Neuroscience, Developmental and Regenerative Biology, The University of Texas at San Antonio, San Antonio, TX, United States.
Janakiram SeshuDepartment of Molecular Microbiology and Immunology, The University of Texas at San Antonio, San Antonio, TX, United States.
Texas Center for Infectious Disease · USThe University of Texas at San Antonio · US

Funding

RCMI Center for Interdiscplinary Health Research CIHRG12MD007591 · NIMHD · UNIVERSITY OF TEXAS SAN ANTONIO · PI PERRY, GEORGE · 2012 to 2016
$10.4M
Pathogen-host interactions in Lyme disease interrogated at Single Cell LevelR21AI149263 · NIAID · UNIVERSITY OF TEXAS SAN ANTONIO · PI SESHU, JANAKIRAM · 2021 to 2022
$413k
NIAID NIH HHS R21 AI149263NIMHD NIH HHS G12 MD007591
6 · The paper itself

Abstract

Introduction: Lyme disease, the most common tick-borne infectious disease in the US, is caused by a spirochetal pathogen Methods: In this study, we used single-cell RNA-Seq analysis in conjunction with mouse genomics exploiting GFP-expressing Results: These data decoded the heterogeneity of splenic neutrophils, macrophages, NK cells, B cells, and T cells in C3H/HeN mice in response to Discussion: These findings serve as a growing catalog of cell phenotypes/biomarkers among murine splenocytes that can be exploited for limiting spirochetal burden to limit the transmission of the agent of Lyme disease to humans via reservoir hosts.

Indexed as

Borrelia burgdorferiLyme DiseaseAnimalsHumansMiceMice, Inbred C3HSingle-Cell Gene Expression AnalysisSpleenTranscriptomecomplementcytokineslyme diseasemyeloid immune responseneutrophil apoptosissingle-cell RNA-Seq

Identifiers

PMID38149246
PMCPMC10749944
OpenAlexW4389479290

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.