Evidence map›Paper›PMID 38147543›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Identification of highly selective SIK1/2 inhibitors that modulate innate immune activation and suppress intestinal inflammation.

Holger Babbe, Thomas B Sundberg, Mark Tichenor, Mark Seierstad, Genesis Bacani, James Berstler, Wenying Chai, Leon Chang, De Michael Chung, Kevin Coe and 34 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Brain connectivity changes associated with acute sleep deprivation: a systematic review.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2025
    Pooled it
  2. Article
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  9. Article
  10. Stimulation of fracture mineralization by salt-inducible kinase inhibitors.Frontiers in bioengineering and biotechnology · 2024
    Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

44 authors at 2 institutions in 1 country.

Holger Babbe *Janssen Research and Development, LLC., Spring House, PA 19477.ORCID 0009-0005-6540-5302
Thomas B Sundberg *Broad Institute of MIT and Harvard, Center for the Development of Therapeutics, Cambridge, MA 02142.
Mark Tichenor *Janssen Research and Development, LLC., San Diego, CA 92121.ORCID 0000-0003-3262-7855
Mark SeierstadJanssen Research and Development, LLC., San Diego, CA 92121.
Genesis BacaniJanssen Research and Development, LLC., San Diego, CA 92121.
James BerstlerBroad Institute of MIT and Harvard, Center for the Development of Therapeutics, Cambridge, MA 02142.ORCID 0000-0003-2545-7405
Wenying ChaiJanssen Research and Development, LLC., San Diego, CA 92121.
Leon ChangJanssen Research and Development, LLC., San Diego, CA 92121.
De Michael ChungJanssen Research and Development, LLC., San Diego, CA 92121.ORCID 0009-0008-4001-4518
Kevin CoeJanssen Research and Development, LLC., San Diego, CA 92121.
Bernard CollinsJanssen Research and Development, LLC., San Diego, CA 92121.
Michael FinleyJanssen Research and Development, LLC., Spring House, PA 19477.ORCID 0000-0002-5547-5519
Alexander GuletskyBroad Institute of MIT and Harvard, Center for the Development of Therapeutics, Cambridge, MA 02142.
Christopher T LemkeBroad Institute of MIT and Harvard, Center for the Development of Therapeutics, Cambridge, MA 02142.ORCID 0000-0001-9419-1511
Puiying A MakJanssen Research and Development, LLC., San Diego, CA 92121.
Ashok MathurJanssen Research and Development, LLC., Spring House, PA 19477.
Eduardo V Mercado-MarinJanssen Research and Development, LLC., San Diego, CA 92121.
Shailesh MetkarBroad Institute of MIT and Harvard, Center for the Development of Therapeutics, Cambridge, MA 02142.
Donald D RaymondBroad Institute of MIT and Harvard, Center for the Development of Therapeutics, Cambridge, MA 02142.
Marie-Laure RivesJanssen Research and Development, LLC., San Diego, CA 92121.ORCID 0000-0003-3324-2412
Michele RizzolioJanssen Research and Development, LLC., San Diego, CA 92121.
Paul L ShafferJanssen Research and Development, LLC., Spring House, PA 19477.
Russell SmithJanssen Research and Development, LLC., San Diego, CA 92121.
Jacqueline SmithJanssen Research and Development, LLC., San Diego, CA 92121.
Ruth SteeleJanssen Research and Development, LLC., Spring House, PA 19477.ORCID 0000-0002-3739-5793
Helena SteffensJanssen Research and Development, LLC., San Diego, CA 92121.
Javier SuarezJanssen Research and Development, LLC., Spring House, PA 19477.ORCID 0009-0003-3173-9799
Gaochao TianJanssen Research and Development, LLC., Spring House, PA 19477.
Nathan MajewskiJanssen Research and Development, LLC., Spring House, PA 19477.ORCID 0009-0008-7766-4725
Laurie P VolakJanssen Research and Development, LLC., San Diego, CA 92121.
Jianmei WeiJanssen Research and Development, LLC., San Diego, CA 92121.
Prerak T DesaiJanssen Research and Development, LLC., Spring House, PA 19477.
Luvena L OngJanssen Research and Development, LLC., Spring House, PA 19477.ORCID 0000-0001-5317-3018
Tatiana KoudriakovaJanssen Research and Development, LLC., San Diego, CA 92121.
Steven D GoldbergJanssen Research and Development, LLC., San Diego, CA 92121.
Gavin HirstJanssen Research and Development, LLC., San Diego, CA 92121.ORCID 0009-0000-5614-8942
Virendar K KaushikBroad Institute of MIT and Harvard, Center for the Development of Therapeutics, Cambridge, MA 02142.
Tatiana OrtJanssen Research and Development, LLC., Spring House, PA 19477.
Nilufer SethJanssen Research and Development, LLC., Spring House, PA 19477.ORCID 0000-0003-1279-0882
Daniel B GrahamCenter for Computational and Integrative Biology, Massachusetts General Hospital, Boston, MA 02114.ORCID 0000-0002-8403-8115
Scott PlevyJanssen Research and Development, LLC., Spring House, PA 19477.
Jennifer D VenableJanssen Research and Development, LLC., San Diego, CA 92121.
Ramnik J XavierCenter for Computational and Integrative Biology, Massachusetts General Hospital, Boston, MA 02114.
Jennifer E TowneJanssen Research and Development, LLC., San Diego, CA 92121.
Janssen (United States) · USBroad Institute · US

Funding

Pilot & Feasibility ProgramP30DK043351 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI RAYMOND T CHUNG · 1991 to 2026
$35.3M
NIDDK NIH HHS P30 DK043351
6 · The paper itself

Abstract

The salt-inducible kinases (SIK) 1-3 are key regulators of pro- versus anti-inflammatory cytokine responses during innate immune activation. The lack of highly SIK-family or SIK isoform-selective inhibitors suitable for repeat, oral dosing has limited the study of the optimal SIK isoform selectivity profile for suppressing inflammation in vivo. To overcome this challenge, we devised a structure-based design strategy for developing potent SIK inhibitors that are highly selective against other kinases by engaging two differentiating features of the SIK catalytic site. This effort resulted in SIK1/2-selective probes that inhibit key intracellular proximal signaling events including reducing phosphorylation of the SIK substrate cAMP response element binding protein (CREB) regulated transcription coactivator 3 (CRTC3) as detected with an internally generated phospho-Ser329-CRTC3-specific antibody. These inhibitors also suppress production of pro-inflammatory cytokines while inducing anti-inflammatory interleukin-10 in activated human and murine myeloid cells and in mice following a lipopolysaccharide challenge. Oral dosing of these compounds ameliorates disease in a murine colitis model. These findings define an approach to generate highly selective SIK1/2 inhibitors and establish that targeting these isoforms may be a useful strategy to suppress pathological inflammation.

Indexed as

Cyclic AMP Response Element-Binding ProteinProtein Serine-Threonine KinasesAnimalsAnti-Inflammatory AgentsCytokinesHumansImmunity, InnateInflammationMiceProtein IsoformsTranscription FactorsAnti-Inflammatory AgentsCRTC3 protein, mouseCyclic AMP Response Element-Binding ProteinCytokinesProtein IsoformsProtein Serine-Threonine KinasesSIK1 protein, humanTranscription Factorsimmunological disordersinflammatory bowel diseasekinase inhibitorsmedicinal chemistrystructure-based drug design

Identifiers

PMID38147543
PMCPMC10769863
OpenAlexW4390237571

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.