Evidence map›Paper›PMID 38146915›Full record

ArticleThe Plant cell2024

Hypothetical chloroplast reading frame 51 encodes a photosystem I assembly factor in cyanobacteria.

Guo-Zheng Dai, Wei-Yu Song, Hai-Feng Xu, Miao Tu, Chen Yu, Zheng-Ke Li, Jin-Long Shang, Chun-Lei Jin, Chao-Shun Ding, Ling-Zi Zuo and 7 more

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. On the non-oxygenic origins of thylakoids.Communications biology · 2025
    Review
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 2 institutions in 2 countries.

Guo-Zheng DaiSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0000-0002-3617-6986
Wei-Yu SongSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0009-0001-5205-7469
Hai-Feng XuSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0000-0003-2857-2628
Miao TuSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0009-0006-4345-7686
Chen YuSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0000-0003-0622-0760
Zheng-Ke LiSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0000-0001-8735-2313
Jin-Long ShangSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0000-0002-6922-7129
Chun-Lei JinSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0009-0003-2983-974X
Chao-Shun DingSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0009-0006-3199-8522
Ling-Zi ZuoSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0000-0002-0384-1847
Yan-Ru LiuSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0009-0006-5969-6403
Wei-Wei YanSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0009-0009-2031-3067
Sha-Sha ZangSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0009-0004-0618-6026
Ke LiuSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0000-0002-7082-262X
Zheng ZhangSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0000-0001-9190-8900
Ralph BockDepartment III, Max-Planck-Institut für Molekulare Pflanzenphysiologie, D-14476 Potsdam-Golm, Germany.ORCID 0000-0001-7502-6940
Bao-Sheng QiuSchool of Life Sciences, and Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan 430079, Hubei, PR China.ORCID 0000-0002-7848-1612
Central China Normal University · CNMax Planck Institute of Molecular Plant Physiology · DE

Funding

Hubei Hongshan Laboratory 2022hszd014National Key Research and Development Program of China 2018YFA0903100National Natural Science Foundation of China 31970254
6 · The paper itself

Abstract

Hypothetical chloroplast open reading frames (ycfs) are putative genes in the plastid genomes of photosynthetic eukaryotes. Many ycfs are also conserved in the genomes of cyanobacteria, the presumptive ancestors of present-day chloroplasts. The functions of many ycfs are still unknown. Here, we generated knock-out mutants for ycf51 (sll1702) in the cyanobacterium Synechocystis sp. PCC 6803. The mutants showed reduced photoautotrophic growth due to impaired electron transport between photosystem II (PSII) and PSI. This phenotype results from greatly reduced PSI content in the ycf51 mutant. The ycf51 disruption had little effect on the transcription of genes encoding photosynthetic complex components and the stabilization of the PSI complex. In vitro and in vivo analyses demonstrated that Ycf51 cooperates with PSI assembly factor Ycf3 to mediate PSI assembly. Furthermore, Ycf51 interacts with the PSI subunit PsaC. Together with its specific localization in the thylakoid membrane and the stromal exposure of its hydrophilic region, our data suggest that Ycf51 is involved in PSI complex assembly. Ycf51 is conserved in all sequenced cyanobacteria, including the earliest branching cyanobacteria of the Gloeobacter genus, and is also present in the plastid genomes of glaucophytes. However, Ycf51 has been lost from other photosynthetic eukaryotic lineages. Thus, Ycf51 is a PSI assembly factor that has been functionally replaced during the evolution of oxygenic photosynthetic eukaryotes.

Indexed as

Bacterial ProteinsOpen Reading FramesPhotosystem I Protein ComplexSynechocystisChloroplastsMutationPhotosynthesisPhotosystem II Protein ComplexThylakoidsBacterial ProteinsPhotosystem II Protein ComplexPhotosystem I Protein Complex

Identifiers

PMID38146915
PMCPMC11062458
OpenAlexW4390228168

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.