Evidence map›Paper›PMID 38146480›Full record

ArticleFrontiers in public health2023

Forecasting daily COVID-19 cases with gradient boosted regression trees and other methods: evidence from U.S. cities.

Anindya Sen, Nathaniel T Stevens, N Ken Tran, Rishav R Agarwal, Qihuang Zhang, Joel A Dubin

Abstract read
In one paragraph

Article in Frontiers in public health, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

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0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Anindya SenDepartment of Economics, University of Waterloo, Waterloo, ON, Canada.
Nathaniel T StevensDepartment of Statistics and Actuarial Science, University of Waterloo, Waterloo, ON, Canada.
N Ken TranSchool of Public Health Sciences, University of Waterloo, Waterloo, ON, Canada.
Rishav R AgarwalCheriton School of Computer Science, University of Waterloo, Waterloo, ON, Canada.
Qihuang ZhangDepartment of Epidemiology, Biostatistics and Occupational Health, McGill College, Montreal, QC, Canada.
Joel A DubinDepartment of Statistics and Actuarial Science, University of Waterloo, Waterloo, ON, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: There is a vast literature on the performance of different short-term forecasting models for country specific COVID-19 cases, but much less research with respect to city level cases. This paper employs daily case counts for 25 Metropolitan Statistical Areas (MSAs) in the U.S. to evaluate the efficacy of a variety of statistical forecasting models with respect to 7 and 28-day ahead predictions. Methods: This study employed Gradient Boosted Regression Trees (GBRT), Linear Mixed Effects (LME), Susceptible, Infectious, or Recovered (SIR), and Seasonal Autoregressive Integrated Moving Average (SARIMA) models to generate daily forecasts of COVID-19 cases from November 2020 to March 2021. Results: Consistent with other research that have employed Machine Learning (ML) based methods, we find that Median Absolute Percentage Error (MAPE) values for both 7-day ahead and 28-day ahead predictions from GBRTs are lower than corresponding values from SIR, Linear Mixed Effects (LME), and Seasonal Autoregressive Integrated Moving Average (SARIMA) specifications for the majority of MSAs during November-December 2020 and January 2021. GBRT and SARIMA models do not offer high-quality predictions for February 2021. However, SARIMA generated MAPE values for 28-day ahead predictions are slightly lower than corresponding GBRT estimates for March 2021. Discussion: The results of this research demonstrate that basic ML models can lead to relatively accurate forecasts at the local level, which is important for resource allocation decisions and epidemiological surveillance by policymakers.

Indexed as

COVID-19CitiesHumansIncidenceModels, StatisticalSeasonsdaily COVID-19 casesepidemiological surveillanceGradient Boosted Regression TreesInfectiousLinear Mixed EffectsMetropolitan Statistical Areasor Recovered (SIR)Seasonal Autoregressive Integrated Moving Average (SARIMA)Susceptible

Identifiers

PMID38146480
PMCPMC10749509

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.