Evidence map›Paper›PMID 38140523›Full record

ArticleViruses2023

Molecular Characterization of a Novel

Igor Koloniuk, Jana Fránová, Jaroslava Přibylová, Tatiana Sarkisova, Josef Špak, Jiunn Luh Tan, Rostislav Zemek, Radek Čmejla, Martina Rejlová, Lucie Valentová and 6 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 2 countries.

Igor KoloniukInstitute of Plant Molecular Biology, Biology Centre, Czech Academy of Sciences, 370 05 Ceske Budejovice, Czech Republic.ORCID 0000-0002-5893-6683
Jana FránováInstitute of Plant Molecular Biology, Biology Centre, Czech Academy of Sciences, 370 05 Ceske Budejovice, Czech Republic.ORCID 0000-0001-8451-1454
Jaroslava PřibylováInstitute of Plant Molecular Biology, Biology Centre, Czech Academy of Sciences, 370 05 Ceske Budejovice, Czech Republic.
Tatiana SarkisovaInstitute of Plant Molecular Biology, Biology Centre, Czech Academy of Sciences, 370 05 Ceske Budejovice, Czech Republic.
Josef ŠpakInstitute of Plant Molecular Biology, Biology Centre, Czech Academy of Sciences, 370 05 Ceske Budejovice, Czech Republic.
Jiunn Luh TanInstitute of Entomology, Biology Centre, Czech Academy of Sciences, 370 05 Ceske Budejovice, Czech Republic.ORCID 0000-0002-5950-4364
Rostislav ZemekInstitute of Entomology, Biology Centre, Czech Academy of Sciences, 370 05 Ceske Budejovice, Czech Republic.ORCID 0000-0001-7640-1503
Radek ČmejlaResearch and Breeding Institute of Pomology Holovousy Ltd., 508 01 Horice, Czech Republic.ORCID 0000-0002-0707-8850
Martina RejlováResearch and Breeding Institute of Pomology Holovousy Ltd., 508 01 Horice, Czech Republic.
Lucie ValentováResearch and Breeding Institute of Pomology Holovousy Ltd., 508 01 Horice, Czech Republic.
Jiří SedlákResearch and Breeding Institute of Pomology Holovousy Ltd., 508 01 Horice, Czech Republic.
Jan HolubJan Holub Ltd., 783 25 Bouzov, Czech Republic.
Jan SkalíkJan Holub Ltd., 783 25 Bouzov, Czech Republic.
Dag-Ragnar BlystadNorwegian Institute of Bioeconomy Research, 1433 Aas, Norway.ORCID 0000-0001-5490-3334
Bijaya SapkotaNorwegian Institute of Bioeconomy Research, 1433 Aas, Norway.ORCID 0000-0003-2142-4171
Zhibo HamborgNorwegian Institute of Bioeconomy Research, 1433 Aas, Norway.ORCID 0000-0001-7070-6621
Czech Academy of Sciences · CZResearch and Breeding Institute of Pomology Holovousy · CZNorwegian Institute of Bioeconomy Research · NO

Funding

EEA Grants and the Technology Agency of the Czech Republic TO01000295
6 · The paper itself

Abstract

Raspberry plants, valued for their fruits, are vulnerable to a range of viruses that adversely affect their yield and quality. Utilizing high-throughput sequencing (HTS), we identified a novel virus, tentatively named raspberry enamovirus 1 (RaEV1), in three distinct raspberry plants. This study provides a comprehensive characterization of RaEV1, focusing on its genomic structure, phylogeny, and possible transmission routes. Analysis of nearly complete genomes from 14 RaEV1 isolates highlighted regions of variance, particularly marked by indel events. The evidence from phylogenetic and sequence analyses supports the classification of RaEV1 as a distinct species within the

Indexed as

AphidsLuteoviridaeRubusVirusesAnimalsPhylogenyPlant Diseasesaphid transmissionHTSraspberryRubusvirus

Identifiers

PMID38140523
PMCPMC10747458
OpenAlexW4388861283

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.