Evidence map›Paper›PMID 38140505›Full record

ArticlePlants (Basel, Switzerland)2023

A Prototype Method for the Detection and Recognition of Pigments in the Environment Based on Optical Property Simulation.

Roman Y Pishchalnikov, Denis D Chesalin, Vasiliy A Kurkov, Uliana A Shkirina, Polina K Laptinskaya, Vasiliy S Novikov, Sergey M Kuznetsov, Andrei P Razjivin, Maksim N Moskovskiy, Alexey S Dorokhov and 2 more

Abstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Roman Y PishchalnikovProkhorov General Physics Institute of the Russian Academy of Sciences, 119991 Moscow, Russia.ORCID 0000-0002-5955-6092
Denis D ChesalinProkhorov General Physics Institute of the Russian Academy of Sciences, 119991 Moscow, Russia.ORCID 0000-0001-8912-8323
Vasiliy A KurkovProkhorov General Physics Institute of the Russian Academy of Sciences, 119991 Moscow, Russia.
Uliana A ShkirinaProkhorov General Physics Institute of the Russian Academy of Sciences, 119991 Moscow, Russia.
Polina K LaptinskayaProkhorov General Physics Institute of the Russian Academy of Sciences, 119991 Moscow, Russia.
Vasiliy S NovikovProkhorov General Physics Institute of the Russian Academy of Sciences, 119991 Moscow, Russia.ORCID 0000-0002-3304-1568
Sergey M KuznetsovProkhorov General Physics Institute of the Russian Academy of Sciences, 119991 Moscow, Russia.ORCID 0000-0002-8378-7085
Andrei P RazjivinBelozersky Research Institute of Physico-Chemical Biology, Moscow State University, 119992 Moscow, Russia.ORCID 0000-0003-0957-5292
Maksim N MoskovskiyFederal State Budgetary Scientific Institution "Federal Scientific Agroengineering Center VIM" (FSAC VIM), 109428 Moscow, Russia.ORCID 0000-0001-5727-8706
Alexey S DorokhovFederal State Budgetary Scientific Institution "Federal Scientific Agroengineering Center VIM" (FSAC VIM), 109428 Moscow, Russia.
Andrey Yu IzmailovFederal State Budgetary Scientific Institution "Federal Scientific Agroengineering Center VIM" (FSAC VIM), 109428 Moscow, Russia.
Sergey V GudkovProkhorov General Physics Institute of the Russian Academy of Sciences, 119991 Moscow, Russia.ORCID 0000-0002-8814-6906

Funding

Ministry of Science and Higher Education of the Russian Federation for large scientific projects in priority areas of scientific and technological development 075-15-2020-774
6 · The paper itself

Abstract

The possibility of pigment detection and recognition in different environments such as solvents or proteins is a challenging, and at the same time demanding, task. It may be needed in very different situations: from the nondestructive in situ identification of pigments in paintings to the early detection of fungal infection in major agro-industrial crops and products. So, we propose a prototype method, the key feature of which is a procedure analyzing the lineshape of a spectrum. The shape of the absorption spectrum corresponding to this transition strongly depends on the immediate environment of a pigment and can serve as a marker to detect the presence of a particular pigment molecule in a sample. Considering carotenoids as an object of study, we demonstrate that the combined operation of the differential evolution algorithm and semiclassical quantum modeling of the optical response based on a generalized spectral density (the number of vibronic modes is arbitrary) allows us to distinguish quantum models of the pigment for different solvents. Moreover, it is determined that to predict the optical properties of monomeric pigments in protein, it is necessary to create a database containing, for each pigment, in addition to the absorption spectra measured in a predefined set of solvents, the parameters of the quantum model found using differential evolution.

Indexed as

absorptioncarotenoidsdifferential evolutionfungal infectionFusarium graminearummultimode Brownian oscillator modeloptical responseoptimization

Identifiers

PMID38140505
PMCPMC10747873

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.