Evidence map›Paper›PMID 38136650›Full record

ArticleBiomolecules2023

Bone Formation in Zebrafish: The Significance of DAF-FM DA Staining for Nitric Oxide Detection.

Ann Huysseune, Ulrike G Larsen, Daria Larionova, Cecilie L Matthiesen, Steen V Petersen, Marc Muller, P Eckhard Witten

Open access · goldAbstract read
In one paragraph

Article in Biomolecules, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Ann HuysseuneResearch Group Evolutionary Developmental Biology, Biology Department, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium.
Ulrike G LarsenDepartment for Biomedicine, Aarhus University, Høegh-Guldbergs Gade 10, 8000 Aarhus, Denmark.
Daria LarionovaResearch Group Evolutionary Developmental Biology, Biology Department, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium.ORCID 0000-0003-1700-3569
Cecilie L MatthiesenDepartment for Biomedicine, Aarhus University, Høegh-Guldbergs Gade 10, 8000 Aarhus, Denmark.ORCID 0000-0002-3062-3896
Steen V PetersenDepartment for Biomedicine, Aarhus University, Høegh-Guldbergs Gade 10, 8000 Aarhus, Denmark.ORCID 0000-0002-9338-911X
Marc MullerLaboratoire d'Organogenèse et Régénération, GIGA-R 1, Avenue de l'Hôpital, B34 Sart Tilman, 4000 Liège, Belgium.ORCID 0000-0001-6030-2164
P Eckhard WittenResearch Group Evolutionary Developmental Biology, Biology Department, Ghent University, K.L. Ledeganckstraat 35, 9000 Ghent, Belgium.ORCID 0000-0002-2928-5762
Aarhus University · DKGhent University · BECharles University · CZUniversity of Liège · BE

Funding

Aarhus University Research Foundation, Denmark AUFF-E-2021-9-17Czech Science Foundation GACR n° 22-25061SGhent University INTEC, International Network on Ectopic Calcificationthe European Union's Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 766347
6 · The paper itself

Abstract

DAF-FM DA is widely used as a live staining compound to show the presence of nitric oxide (NO) in cells. Applying this stain to live zebrafish embryos is known to indicate early centers of bone formation, but the precise (cellular) location of the signal has hitherto not been revealed. Using sections of zebrafish embryos live-stained with DAF-FM DA, we could confirm that the fluorescent signals were predominantly located in areas of ongoing bone formation. Signals were observed in the bone and tooth matrix, in the notochord sheath, as well as in the bulbus arteriosus. Surprisingly, however, they were exclusively extracellular, even after very short staining times. Von Kossa and Alizarin red S staining to reveal mineral deposits showed that DAF-FM DA stains both the mineralized and non-mineralized bone matrix (osteoid), excluding that DAF-FM DA binds non-specifically to calcified structures. The importance of NO in bone formation by osteoblasts is nevertheless undisputed, as shown by the absence of bone structures after the inhibition of NOS enzymes that catalyze the formation of NO. In conclusion, in zebrafish skeletal biology, DAF-FM DA is appropriate to reveal bone formation in vivo, independent of mineralization of the bone matrix, but it does not demonstrate intracellular NO.

Indexed as

OsteogenesisZebrafishAnimalsBone and BonesColoring AgentsNitric OxideStaining and LabelingColoring AgentsNitric Oxidebulbus arteriosusnitric oxidenotochord sheathossificationosteoblastszebrafish

Identifiers

PMID38136650
PMCPMC10742054
OpenAlexW4389624947

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.