Evidence map›Paper›PMID 38134185›Full record

ArticlePloS one2023

AtMYB50 regulates root cell elongation by upregulating PECTIN METHYLESTERASE INHIBITOR 8 in Arabidopsis thaliana.

Kosuke Mase, Honomi Mizuno, Norihito Nakamichi, Takamasa Suzuki, Takaaki Kojima, Sho Kamiya, Taiga Takeuchi, Chiko Kondo, Harumi Yamashita, Satomi Sakaoka and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
2.0field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 5 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Kosuke MaseFaculty of Agriculture, Meijo University, Nagoya, Aichi, Japan.
Honomi MizunoFaculty of Agriculture, Meijo University, Nagoya, Aichi, Japan.
Norihito NakamichiGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Aichi, Japan.
Takamasa SuzukiDepartment of Biological Chemistry, College of Bioscience and Biotechnology, Chubu University, Kasugai, Aichi, Japan.
Takaaki KojimaFaculty of Agriculture, Meijo University, Nagoya, Aichi, Japan.ORCID 0000-0001-7282-121X
Sho KamiyaFaculty of Agriculture, Meijo University, Nagoya, Aichi, Japan.
Taiga TakeuchiFaculty of Agriculture, Meijo University, Nagoya, Aichi, Japan.
Chiko KondoFaculty of Agriculture, Meijo University, Nagoya, Aichi, Japan.
Harumi YamashitaFaculty of Agriculture, Meijo University, Nagoya, Aichi, Japan.
Satomi SakaokaFaculty of Agriculture, Meijo University, Nagoya, Aichi, Japan.
Atsushi MorikamiFaculty of Agriculture, Meijo University, Nagoya, Aichi, Japan.
Hironaka TsukagoshiFaculty of Agriculture, Meijo University, Nagoya, Aichi, Japan.ORCID 0000-0003-0058-4926
Meijo University · JPChubu University · JPNagoya University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant root development involves multiple signal transduction pathways. Notably, phytohormones like auxin and cytokinin are well characterized for their molecular mechanisms of action. Reactive oxygen species (ROS) serve as crucial signaling molecules in controlling root development. The transcription factor, UPBEAT1 (UPB1) is responsible for maintaining ROS homeostasis at the root tip, influencing the transition from cell proliferation to differentiation. While UPB1 directly regulates peroxidase expression to control ROS homeostasis, it targets genes other than peroxidases, suggesting its involvement in root growth through non-ROS signals. Our investigation focused on the transcription factor MYB50, a direct target of UPB1, in Arabidopsis thaliana. By analyzing multiple fluorescent proteins and conducting RNA-seq and ChIP-seq, we unraveled a step in the MYB50 regulatory gene network. This analysis, in conjunction with the UPB1 regulatory network, demonstrated that MYB50 directly regulates the expression of PECTIN METHYLESTERASE INHIBITOR 8 (PMEI8). Overexpressing PMEI8, similar to the MYB50, resulted in reduced mature cell length. These findings establish MYB50 as a regulator of root growth within the UPB1 gene regulatory network. Our study presents a model involving transcriptional regulation by MYB50 in the UPB1 regulated root growth system and sheds light on cell elongation via pectin modification.

Indexed as

ArabidopsisArabidopsis ProteinsCarboxylic Ester HydrolasesGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantPlant RootsTranscription FactorsBasic Helix-Loop-Helix ProteinsCell ProliferationIndoleacetic AcidsReactive Oxygen SpeciesArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsCarboxylic Ester HydrolasesIndoleacetic AcidspectinesteraseReactive Oxygen SpeciesTranscription FactorsUPBEAT1 protein, Arabidopsis

Identifiers

PMID38134185
PMCPMC10745173
OpenAlexW4390100530

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.