Evidence map›Paper›PMID 38133394›Full record

ArticleToxics2023

Semi-Correlations for Building Up a Simulation of Eye Irritation.

Andrey A Toropov, Alla P Toropova, Alessandra Roncaglioni, Emilio Benfenati

Abstract read
In one paragraph

Article in Toxics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Andrey A ToropovIstituto di Ricerche Farmacologiche Mario Negri IRCCS, Via Mario Negri 2, 20156 Milano, Italy.ORCID 0000-0001-6864-6340
Alla P ToropovaIstituto di Ricerche Farmacologiche Mario Negri IRCCS, Via Mario Negri 2, 20156 Milano, Italy.ORCID 0000-0002-4194-9963
Alessandra RoncaglioniIstituto di Ricerche Farmacologiche Mario Negri IRCCS, Via Mario Negri 2, 20156 Milano, Italy.
Emilio BenfenatiIstituto di Ricerche Farmacologiche Mario Negri IRCCS, Via Mario Negri 2, 20156 Milano, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The OECD recognizes that data on a compound's ability to treat eye irritation are essential for the assessment of new compounds on the market. In silico models are frequently used to provide information when experimental data are lacking. Semi-correlations, as they are called, can be useful to build up categorical models for eye irritation. Semi-correlations are latent regressions that can be used when the endpoint is expressed by two values: 1 for an active molecule and 0 for an inactive molecule. The regression line is based on the descriptor values which serve to distribute the data into four classes: true positive, true negative, false positive, and false negative. These values are applied to calculate the corresponding statistical criterion for assessing the predictive potential of the categorical model. In our model, the descriptor is the sum of what are termed correlation weights. These are defined by optimization using the Monte Carlo method. The target function of the optimization is related to the determination coefficient and the mean absolute error for the training set. Our model gives results that are better than those previously reported for the same endpoint.

Indexed as

CORAL softwareeye irritationmonte carlo methodSARsemi-correlationSMILES

Identifiers

PMID38133394
PMCPMC10747944

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.