Evidence map›Paper›PMID 38130923›Full record

ArticlePeerJ2023

Integrated transcriptome and metabolome revealed the drought responsive metabolic pathways in Oriental Lily

Zhenkui Cui, Huaming Huang, Tianqing Du, Jianfeng Chen, Shuyan Huang, Qushun Dai

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 2 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Zhenkui CuiDepartment of Landscape Architecture, Fujian Forestry Vocational & Technical College, Nanping, Fujian, China.
Huaming HuangDepartment of Landscape Architecture, Fujian Forestry Vocational & Technical College, Nanping, Fujian, China.
Tianqing DuCollege of Agriculture, Shanxi Agricultural University, Taigu, Shanxi, China.
Jianfeng ChenDepartment of Landscape Architecture, Fujian Forestry Vocational & Technical College, Nanping, Fujian, China.
Shuyan HuangDepartment of Landscape Architecture, Fujian Forestry Vocational & Technical College, Nanping, Fujian, China.
Qushun DaiDepartment of Landscape Architecture, Fujian Forestry Vocational & Technical College, Nanping, Fujian, China.
Fujian Agriculture and Forestry University · CNShanxi Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: Lily is an essential ornamental flowering species worldwide. Drought stress is a major constraint affecting the morphology and physiology and lily leaves and flowers. Therefore, understanding the molecular mechanism underlying lily response to drought stress is important. Method: Transcriptome and metabolome analysis were performed on Oriental Lily subjected to drought stress. Result: Most transcription factors and metabolites yielded by the conjoint analysis displayed a downregulated expression pattern. Differential genes and metabolites mainly co-enriched in glycolic pathways related to sugars, such as galactose, and sucrose, glycolysis and gluconeogenesis, indicating that drought stress reduced the sugar metabolism level of Oriental Lily. Combined with transcriptome and metabolome data, nine pairs of differentially expressed metabolites and the genes ( Conclusion: The enrichment of sugar-related pathways advocates the potential role of glucose metabolism in drought stress. Our study provides theoretical information related to the glucose-mediated drought response and would be fruitful in future lily breeding programs.

Indexed as

LiliumTranscriptomeDroughtsGlucoseMetabolic Networks and PathwaysMetabolomePlant BreedingSugarsGlucoseSugarsDroughtLilyMetabolomeTranscriptomeTRINITY_DN2608 gene

Identifiers

PMID38130923
PMCPMC10734436
OpenAlexW4389923713

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.