Evidence map›Paper›PMID 38129659›Full record

ArticleMolecular psychiatry2024

TREX1 is required for microglial cholesterol homeostasis and oligodendrocyte terminal differentiation in human neural assembloids.

Gabriela Goldberg, Luisa Coelho, Guoya Mo, Laura A Adang, Meenakshi Patne, Zhoutao Chen, Ivan Garcia-Bassets, Pinar Mesci, Alysson R Muotri

Open access · hybridAbstract read
In one paragraph

Article in Molecular psychiatry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Engineering brain organoids: from neurodevelopmental modeling to translational barriers.Journal of artificial organs : the official journal of the Japanese Society for Artificial Organs · 2026
    Review
  3. Article
  4. Rigorous genetic diagnosis review in natural history studies.Orphanet journal of rare diseases · 2026
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. [Research progress on the cGAS-STING signaling pathway in immune-mediated inflammatory diseases in children].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2025
    Review
  12. Article
  13. Review
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Gabriela GoldbergDepartment of Pediatrics, School of Medicine, University of California San Diego, La Jolla, CA, 92093, USA.
Luisa CoelhoDepartment of Pediatrics, School of Medicine, University of California San Diego, La Jolla, CA, 92093, USA.
Guoya MoUniversal Sequencing Technology Corporation, Carlsbad, CA, 92011, USA.
Laura A AdangDivision of Neurology, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Meenakshi PatneDepartment of Pediatrics, School of Medicine, University of California San Diego, La Jolla, CA, 92093, USA.
Zhoutao ChenUniversal Sequencing Technology Corporation, Carlsbad, CA, 92011, USA.
Ivan Garcia-BassetsUniversal Sequencing Technology Corporation, Carlsbad, CA, 92011, USA.
Pinar MesciDepartment of Pediatrics, School of Medicine, University of California San Diego, La Jolla, CA, 92093, USA. pmesci@gmail.com.ORCID 0000-0003-3402-5671
Alysson R MuotriDepartment of Pediatrics, School of Medicine, University of California San Diego, La Jolla, CA, 92093, USA. muotri@ucsd.edu.ORCID 0000-0003-0867-2875
University of California San Diego · USChildren's Hospital of Philadelphia · USNational Space Biomedical Research Institute · US

Funding

Validation of the GMFC-MLDU54NS115052 · NINDS · CHILDREN'S HOSP OF PHILADELPHIA · PI Adeline Lucie Vanderver · 2019 to 2026
$14.3M
Clinical Outcomes in Aicardi Goutières SyndromeU01NS106845 · NINDS · CHILDREN'S HOSP OF PHILADELPHIA · PI VANDERVER, ADELINE LUCIE · 2019 to 2023
$7.5M
Proteogenetics of Autism Spectrum DisordersR01MH100175 · NIMH · SCRIPPS RESEARCH INSTITUTE, THE · PI MUOTRI, ALYSSON R., YATES III, JOHN R · 2013 to 2025
$7.4M
A new brain organoid model for NeuroHIV and the impact of opioidsR01DA056908 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Alysson R. Muotri · 2022 to 2026
$3.9M
Brain pathology and function in a chronic mouse model of ZIKV transmissionR01NS105969 · NINDS · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI MUOTRI, ALYSSON R., OLSON, STEVEN H · 2019 to 2023
$3.3M
The Impact of hiPSC-Derived Microglia in Human Brain Development in Health and DiseaseR01NS123642 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MUOTRI, ALYSSON R. · 2021 to 2025
$2.2M
Impact of prenatal inflammation on developing human brainR01HD107788 · NICHD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Alysson R. Muotri · 2022 to 2026
$1.7M
SOCIAL AND EMOTIONAL PREDICTORS OF HEALTH AND LONGEVITYR01AG008825 · NIA · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI FRIEDMAN, HOWARD S. · 1990 to 2004
$1.1M
Clinical measures in Aicardi Goutieres SyndromeK23NS114113 · NINDS · CHILDREN'S HOSP OF PHILADELPHIA · PI ADANG, LAURA ANN · 2019 to 2023
$947k
Illumina NovaSeq 6000 Sequencing SystemS10OD026929 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JEPSEN, KRISTEN LYNN · 2019 to 2019
$600k
JEOL JEM-1400Plus Transmission Electron MicroscopeS10OD023527 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FARQUHAR, MARILYN GIST · 2017 to 2017
$579k
Incucyte Zoom Live Cell Analysis SystemS10OD025060 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI WILLERT, KARL H · 2018 to 2018
$173k
California Institute for Regenerative Medicine (CIRM) DISC1-08825National Science Foundation (NSF) DGE-1650112National Science Foundation (NSF) DGE-2038238NICHD NIH HHS R01 HD107788NIDA NIH HHS R01 DA056908NIH HHS S10 OD023527NIH HHS S10 OD025060NIH HHS S10 OD026929NIMH NIH HHS R01 MH100175NINDS NIH HHS K23 NS114113NINDS NIH HHS R01 NS105969NINDS NIH HHS R01 NS123642NINDS NIH HHS U01 NS106845NINDS NIH HHS U54 NS115052U.S. Department of Health & Human Services | NIH | Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) R01HD107788U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) K23NS114113U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) R01NS105969U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) R01NS123642U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) U54TR002823
6 · The paper itself

Abstract

Three Prime Repair Exonuclease 1 (TREX1) gene mutations have been associated with Aicardi-Goutières Syndrome (AGS) - a rare, severe pediatric autoimmune disorder that primarily affects the brain and has a poorly understood etiology. Microglia are brain-resident macrophages indispensable for brain development and implicated in multiple neuroinflammatory diseases. However, the role of TREX1 - a DNase that cleaves cytosolic nucleic acids, preventing viral- and autoimmune-related inflammatory responses - in microglia biology remains to be elucidated. Here, we leverage a model of human embryonic stem cell (hESC)-derived engineered microglia-like cells, bulk, and single-cell transcriptomics, optical and transmission electron microscopy, and three-month-old assembloids composed of microglia and oligodendrocyte-containing organoids to interrogate TREX1 functions in human microglia. Our analyses suggest that TREX1 influences cholesterol metabolism, leading to an active microglial morphology with increased phagocytosis in the absence of TREX1. Notably, regulating cholesterol metabolism with an HMG-CoA reductase inhibitor, FDA-approved atorvastatin, rescues these microglial phenotypes. Functionally, TREX1 in microglia is necessary for the transition from gliogenic intermediate progenitors known as pre-oligodendrocyte precursor cells (pre-OPCs) to precursors of the oligodendrocyte lineage known as OPCs, impairing oligodendrogenesis in favor of astrogliogenesis in human assembloids. Together, these results suggest routes for therapeutic intervention in pathologies such as AGS based on microglia-specific molecular and cellular mechanisms.

Indexed as

Cell DifferentiationCholesterolExodeoxyribonucleasesHomeostasisMicrogliaOligodendrogliaPhosphoproteinsAutoimmune Diseases of the Nervous SystemBrainHuman Embryonic Stem CellsHumansNervous System MalformationsOrganoidsCholesterolExodeoxyribonucleasesPhosphoproteinsthree prime repair exonuclease 1

Identifiers

PMID38129659
PMCPMC11153041
OpenAlexW4390057870

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.